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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
HVVYVGNKPVMNYVLATLTQLNEGADEVVIKARGRAISRAVDVAEIVRNRFMPGVKVKEI
KIDTEELESEQGRRSNVSTIEIVLAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1nfh-a1-m2-cB 86 86 1.0000 1.0000 1.0000 1.92e-57 1nfh-a1-m1-cA_1nfh-a1-m2-cB
2 1nfh-a1-m1-cA 86 86 1.0000 1.0000 1.0000 1.92e-57 1nfh-a1-m1-cA_1nfh-a1-m2-cB
3 1nfj-a1-m4-cA 87 86 1.0000 0.9885 1.0000 1.98e-57 1nfj-a1-m1-cA_1nfj-a1-m4-cA
4 1nfj-a1-m3-cA 87 86 1.0000 0.9885 1.0000 1.98e-57 1nfj-a1-m1-cA_1nfj-a1-m3-cA
5 1nfj-a1-m1-cA 87 86 1.0000 0.9885 1.0000 1.98e-57 1nfj-a1-m1-cA_1nfj-a1-m3-cA, 1nfj-a1-m1-cA_1nfj-a1-m4-cA
6 2z7c-a2-m1-cC 89 87 0.7558 0.7303 0.7471 3.81e-39 2z7c-a2-m1-cC_2z7c-a2-m1-cD
7 2z7c-a2-m1-cD 92 87 0.7558 0.7065 0.7471 4.30e-39 2z7c-a2-m1-cC_2z7c-a2-m1-cD
8 3toe-a1-m1-cB 86 86 0.6395 0.6395 0.6395 4.23e-34 3toe-a1-m1-cA_3toe-a1-m1-cB
9 3toe-a1-m1-cA 86 86 0.6395 0.6395 0.6395 4.23e-34 3toe-a1-m1-cA_3toe-a1-m1-cB
10 2bky-a1-m1-cB 89 87 0.6163 0.5955 0.6092 1.82e-32 2bky-a1-m1-cA_2bky-a1-m1-cB
11 2bky-a1-m1-cA 89 87 0.6163 0.5955 0.6092 1.82e-32 2bky-a1-m1-cA_2bky-a1-m1-cB
12 1h0x-a1-m1-cB 89 87 0.6163 0.5955 0.6092 1.82e-32 1h0x-a1-m1-cA_1h0x-a1-m1-cB
13 1h0x-a1-m1-cA 89 87 0.6163 0.5955 0.6092 1.82e-32 1h0x-a1-m1-cA_1h0x-a1-m1-cB
14 4z9e-a2-m1-cD 85 86 0.5581 0.5647 0.5581 9.89e-32 4z9e-a2-m1-cC_4z9e-a2-m1-cD
15 4z9e-a2-m1-cC 85 86 0.5581 0.5647 0.5581 9.89e-32 4z9e-a2-m1-cC_4z9e-a2-m1-cD
16 3wbm-a1-m1-cC 86 87 0.5814 0.5814 0.5747 5.60e-27 3wbm-a1-m1-cA_3wbm-a1-m1-cC
17 3wbm-a1-m1-cA 86 87 0.5814 0.5814 0.5747 5.60e-27 3wbm-a1-m1-cA_3wbm-a1-m1-cC
18 3u6y-a1-m1-cC 99 89 0.5814 0.5051 0.5618 4.18e-25 3u6y-a1-m1-cA_3u6y-a1-m1-cC
19 3u6y-a1-m1-cA 99 89 0.5814 0.5051 0.5618 4.18e-25 3u6y-a1-m1-cA_3u6y-a1-m1-cC
20 2bky-a1-m1-cY 86 58 0.2558 0.2558 0.3793 9.66e-08 2bky-a1-m1-cX_2bky-a1-m1-cY
21 2bky-a1-m1-cX 86 58 0.2558 0.2558 0.3793 9.66e-08 2bky-a1-m1-cX_2bky-a1-m1-cY
22 1udv-a1-m1-cB 86 58 0.2558 0.2558 0.3793 9.66e-08 1udv-a1-m1-cB_1udv-a1-m1-cA
23 1udv-a1-m1-cA 88 58 0.2558 0.2500 0.3793 9.76e-08 1udv-a1-m1-cB_1udv-a1-m1-cA
24 2o1x-a2-m1-cD 530 63 0.2558 0.0415 0.3492 0.47 2o1x-a2-m1-cD_2o1x-a2-m1-cC
25 2o1x-a2-m1-cC 538 63 0.2558 0.0409 0.3492 0.52 2o1x-a2-m1-cD_2o1x-a2-m1-cC
26 3h3a-a1-m1-cA 417 43 0.1860 0.0384 0.3721 2.2 3h3a-a1-m1-cA_3h3a-a1-m1-cB
27 6x6f-a3-m1-cH 84 45 0.1977 0.2024 0.3778 2.8 6x6f-a3-m1-cF_6x6f-a3-m1-cH
28 6x6f-a3-m1-cF 84 45 0.1977 0.2024 0.3778 2.8 6x6f-a3-m1-cF_6x6f-a3-m1-cH
29 3jzv-a2-m6-cA 144 45 0.1395 0.0833 0.2667 4.0 3jzv-a2-m1-cA_3jzv-a2-m6-cA, 3jzv-a2-m3-cA_3jzv-a2-m6-cA, 3jzv-a2-m5-cA_3jzv-a2-m6-cA
30 3jzv-a2-m5-cA 144 45 0.1395 0.0833 0.2667 4.0 3jzv-a2-m5-cA_3jzv-a2-m6-cA
31 3jzv-a2-m3-cA 144 45 0.1395 0.0833 0.2667 4.0 3jzv-a2-m3-cA_3jzv-a2-m6-cA
32 3jzv-a2-m1-cA 144 45 0.1395 0.0833 0.2667 4.0 3jzv-a2-m1-cA_3jzv-a2-m6-cA
33 3dtn-a1-m1-cA 220 38 0.1628 0.0636 0.3684 5.0 3dtn-a1-m1-cB_3dtn-a1-m1-cA
34 3dtn-a1-m1-cB 213 38 0.1628 0.0657 0.3684 5.4 3dtn-a1-m1-cB_3dtn-a1-m1-cA
35 3h3a-a1-m1-cB 418 40 0.1744 0.0359 0.3750 8.2 3h3a-a1-m1-cA_3h3a-a1-m1-cB
36 3kgl-a1-m1-cB 387 38 0.1395 0.0310 0.3158 9.9 3kgl-a1-m1-cB_3kgl-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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