Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=50)
HVWPVQDAKARFSEFLDACITEGPQIVSRRGAEEAVLVPIGEWRRLQAAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2odk-a3-m4-cD 51 50 1.0000 0.9804 1.0000 2.07e-31 2odk-a3-m2-cB_2odk-a3-m4-cD, 2odk-a3-m4-cC_2odk-a3-m4-cD
2 2odk-a3-m4-cC 50 50 1.0000 1.0000 1.0000 2.20e-31 2odk-a3-m4-cC_2odk-a3-m4-cD
3 2odk-a3-m2-cB 50 50 1.0000 1.0000 1.0000 2.20e-31 2odk-a3-m2-cB_2odk-a3-m4-cD
4 3g5o-a1-m1-cD 92 48 0.3600 0.1957 0.3750 1.09e-04 3g5o-a1-m1-cA_3g5o-a1-m1-cD
5 3g5o-a1-m1-cA 92 48 0.3600 0.1957 0.3750 1.09e-04 3g5o-a1-m1-cA_3g5o-a1-m1-cD
6 3ggf-a3-m1-cB 270 20 0.1800 0.0333 0.4500 3.3 3ggf-a3-m1-cB_3ggf-a3-m1-cA
7 3ggf-a3-m1-cA 275 20 0.1800 0.0327 0.4500 3.3 3ggf-a3-m1-cB_3ggf-a3-m1-cA
8 3la6-a2-m1-cI 260 24 0.1400 0.0269 0.2917 5.2 3la6-a2-m1-cJ_3la6-a2-m1-cI
9 3la6-a2-m1-cJ 259 24 0.1400 0.0270 0.2917 5.3 3la6-a2-m1-cJ_3la6-a2-m1-cI
10 6tdu-a1-m1-ch 460 31 0.2000 0.0217 0.3226 7.2 6tdu-a1-m1-cH_6tdu-a1-m1-ch
11 6tdu-a1-m1-cH 460 31 0.2000 0.0217 0.3226 7.2 6tdu-a1-m1-cH_6tdu-a1-m1-ch
12 6tdv-a1-m1-ch 388 31 0.2000 0.0258 0.3226 7.2 6tdv-a1-m1-cH_6tdv-a1-m1-ch
13 6tdv-a1-m1-cH 388 31 0.2000 0.0258 0.3226 7.2 6tdv-a1-m1-cH_6tdv-a1-m1-ch

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600