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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
IAVGMIETRGFPAVVEAADSMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGIE
AANRVNGGEVLSTHIIARPHENLEYVLPIL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3dnc-a1-m6-cA 90 90 1.0000 1.0000 1.0000 2.85e-59 3dnc-a1-m2-cA_3dnc-a1-m6-cA
2 3dnc-a1-m2-cA 90 90 1.0000 1.0000 1.0000 2.85e-59 3dnc-a1-m2-cA_3dnc-a1-m6-cA
3 3ssq-a1-m2-cC 100 89 0.9222 0.8300 0.9326 2.91e-55 3ssq-a1-m1-cC_3ssq-a1-m2-cC
4 3ssq-a1-m1-cC 100 89 0.9222 0.8300 0.9326 2.91e-55 3ssq-a1-m1-cC_3ssq-a1-m2-cC
5 6owg-a1-m1-cDA 100 89 0.8889 0.8000 0.8989 6.31e-53 6owg-a1-m1-cC8_6owg-a1-m1-cDA
6 6owg-a1-m1-cC8 100 89 0.8889 0.8000 0.8989 6.31e-53 6owg-a1-m1-cC8_6owg-a1-m1-cDA
7 6owf-a1-m1-cW 100 89 0.8889 0.8000 0.8989 6.31e-53 6owf-a1-m1-cA6_6owf-a1-m1-cW
8 6owf-a1-m1-cA6 100 89 0.8889 0.8000 0.8989 6.31e-53 6owf-a1-m1-cA6_6owf-a1-m1-cW
9 4ox6-a1-m3-cB 93 88 0.5333 0.5161 0.5455 1.69e-29 4ox6-a1-m3-cB_4ox6-a1-m3-cA
10 2a10-a1-m1-cE 102 88 0.5556 0.4902 0.5682 2.11e-29 2a10-a1-m1-cD_2a10-a1-m1-cE
11 2a10-a1-m1-cD 102 88 0.5556 0.4902 0.5682 2.11e-29 2a10-a1-m1-cD_2a10-a1-m1-cE
12 4ox6-a1-m3-cA 103 88 0.5333 0.4660 0.5455 2.15e-29 4ox6-a1-m3-cB_4ox6-a1-m3-cA
13 3mpy-a1-m6-cA 96 88 0.5556 0.5208 0.5682 8.47e-25 3mpy-a1-m2-cA_3mpy-a1-m6-cA
14 3mpy-a1-m2-cA 96 88 0.5556 0.5208 0.5682 8.47e-25 3mpy-a1-m2-cA_3mpy-a1-m6-cA
15 5d6v-a1-m6-cA 90 87 0.5667 0.5667 0.5862 7.31e-24 5d6v-a1-m2-cA_5d6v-a1-m6-cA
16 5d6v-a1-m2-cA 90 87 0.5667 0.5667 0.5862 7.31e-24 5d6v-a1-m2-cA_5d6v-a1-m6-cA
17 7ckc-a1-m1-cCz 89 88 0.5222 0.5281 0.5341 9.55e-24 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
18 7ckc-a1-m1-cBi 89 88 0.5222 0.5281 0.5341 9.55e-24 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
19 2ewh-a1-m6-cA 92 88 0.5222 0.5109 0.5341 1.08e-23 2ewh-a1-m2-cA_2ewh-a1-m6-cA
20 2ewh-a1-m2-cA 92 88 0.5222 0.5109 0.5341 1.08e-23 2ewh-a1-m2-cA_2ewh-a1-m6-cA
21 4axj-a1-m1-cA 87 87 0.5444 0.5632 0.5632 4.93e-23 4axj-a1-m2-cC_4axj-a1-m1-cA
22 4axj-a1-m2-cC 86 87 0.5444 0.5698 0.5632 5.30e-23 4axj-a1-m2-cC_4axj-a1-m1-cA
23 7mmx-a2-m1-cD 86 86 0.5333 0.5581 0.5581 1.77e-21 7mmx-a2-m3-cF_7mmx-a2-m1-cD
24 7mmx-a2-m3-cF 85 86 0.5333 0.5647 0.5581 2.01e-21 7mmx-a2-m3-cF_7mmx-a2-m1-cD
25 7mgp-a1-m6-cA 93 86 0.4778 0.4624 0.5000 6.75e-20 7mgp-a1-m2-cA_7mgp-a1-m6-cA
26 7mgp-a1-m2-cA 93 86 0.4778 0.4624 0.5000 6.75e-20 7mgp-a1-m2-cA_7mgp-a1-m6-cA
27 3pac-a1-m3-cA 183 85 0.3778 0.1858 0.4000 3.71e-08 3pac-a1-m2-cA_3pac-a1-m3-cA
28 3pac-a1-m3-cA 183 61 0.2222 0.1093 0.3279 1.15e-04 3pac-a1-m2-cA_3pac-a1-m3-cA
29 3pac-a1-m2-cA 183 85 0.3778 0.1858 0.4000 3.71e-08 3pac-a1-m2-cA_3pac-a1-m3-cA
30 3pac-a1-m2-cA 183 61 0.2222 0.1093 0.3279 1.15e-04 3pac-a1-m2-cA_3pac-a1-m3-cA
31 3nwg-a2-m3-cA 174 64 0.2778 0.1437 0.3906 7.81e-07 3nwg-a2-m2-cA_3nwg-a2-m3-cA
32 3nwg-a2-m3-cA 174 85 0.3333 0.1724 0.3529 2.35e-06 3nwg-a2-m2-cA_3nwg-a2-m3-cA
33 3nwg-a2-m2-cA 174 64 0.2778 0.1437 0.3906 7.81e-07 3nwg-a2-m2-cA_3nwg-a2-m3-cA
34 3nwg-a2-m2-cA 174 85 0.3333 0.1724 0.3529 2.35e-06 3nwg-a2-m2-cA_3nwg-a2-m3-cA
35 3nwg-a1-m6-cA 174 64 0.2778 0.1437 0.3906 7.81e-07 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
36 3nwg-a1-m6-cA 174 85 0.3333 0.1724 0.3529 2.35e-06 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
37 3nwg-a1-m3-cA 174 64 0.2778 0.1437 0.3906 7.81e-07 3nwg-a1-m3-cA_3nwg-a1-m6-cA
38 3nwg-a1-m3-cA 174 85 0.3333 0.1724 0.3529 2.35e-06 3nwg-a1-m3-cA_3nwg-a1-m6-cA
39 3nwg-a1-m1-cA 174 64 0.2778 0.1437 0.3906 7.81e-07 3nwg-a1-m1-cA_3nwg-a1-m6-cA
40 3nwg-a1-m1-cA 174 85 0.3333 0.1724 0.3529 2.35e-06 3nwg-a1-m1-cA_3nwg-a1-m6-cA
41 1up6-a2-m1-cE 384 37 0.1556 0.0365 0.3784 3.8 1up6-a2-m1-cE_1up6-a2-m1-cH
42 1up4-a2-m1-cH 396 37 0.1556 0.0354 0.3784 4.0 1up4-a2-m1-cH_1up4-a2-m1-cG
43 1up4-a2-m1-cG 402 37 0.1556 0.0348 0.3784 4.1 1up4-a2-m1-cH_1up4-a2-m1-cG
44 1up6-a2-m1-cH 389 37 0.1556 0.0360 0.3784 4.5 1up6-a2-m1-cE_1up6-a2-m1-cH
45 7dhq-a1-m1-cA 205 55 0.2000 0.0878 0.3273 4.5 7dhq-a1-m1-cC_7dhq-a1-m1-cA
46 7dhq-a1-m1-cF 204 55 0.2000 0.0882 0.3273 4.6 7dhq-a1-m1-cC_7dhq-a1-m1-cF
47 7dhq-a1-m1-cC 204 55 0.2000 0.0882 0.3273 4.6 7dhq-a1-m1-cC_7dhq-a1-m1-cA, 7dhq-a1-m1-cC_7dhq-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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