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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=37)
IDARFNVSRVAVMIVALQQRPDLLWEGTRDRLHQPYR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5was-a1-m2-cB 37 37 1.0000 1.0000 1.0000 6.14e-22 5was-a1-m1-cB_5was-a1-m2-cB
2 5was-a1-m1-cB 37 37 1.0000 1.0000 1.0000 6.14e-22 5was-a1-m1-cB_5was-a1-m2-cB
3 5wat-a3-m3-cB 306 37 1.0000 0.1209 1.0000 6.71e-21 5wat-a3-m1-cB_5wat-a3-m3-cB
4 5wat-a3-m1-cB 306 37 1.0000 0.1209 1.0000 6.71e-21 5wat-a3-m1-cB_5wat-a3-m3-cB
5 5wat-a1-m1-cB 306 37 1.0000 0.1209 1.0000 6.71e-21 5wat-a1-m1-cB_5wat-a1-m4-cA
6 5wat-a1-m4-cA 310 37 1.0000 0.1194 1.0000 8.43e-21 5wat-a1-m1-cB_5wat-a1-m4-cA
7 6cyz-a1-m1-cB 295 37 0.6757 0.0847 0.6757 4.08e-12 6cyz-a1-m1-cA_6cyz-a1-m1-cB
8 6cyz-a1-m1-cA 295 37 0.6757 0.0847 0.6757 4.08e-12 6cyz-a1-m1-cA_6cyz-a1-m1-cB
9 8fwq-a1-m1-cD 818 36 0.3243 0.0147 0.3333 3.4 8fwq-a1-m1-cB_8fwq-a1-m1-cD, 8fwq-a1-m1-cC_8fwq-a1-m1-cD
10 8fwq-a1-m1-cC 818 36 0.3243 0.0147 0.3333 3.4 8fwq-a1-m1-cC_8fwq-a1-m1-cD
11 8fwq-a1-m1-cB 818 36 0.3243 0.0147 0.3333 3.4 8fwq-a1-m1-cB_8fwq-a1-m1-cD
12 7f5a-a1-m1-cD 818 36 0.3243 0.0147 0.3333 3.4 7f5a-a1-m1-cB_7f5a-a1-m1-cD, 7f5a-a1-m1-cD_7f5a-a1-m1-cC
13 7f5a-a1-m1-cB 818 36 0.3243 0.0147 0.3333 3.4 7f5a-a1-m1-cB_7f5a-a1-m1-cC, 7f5a-a1-m1-cB_7f5a-a1-m1-cD
14 7f57-a1-m1-cD 818 36 0.3243 0.0147 0.3333 3.4 7f57-a1-m1-cD_7f57-a1-m1-cA
15 7f56-a1-m1-cD 818 36 0.3243 0.0147 0.3333 3.4 7f56-a1-m1-cD_7f56-a1-m1-cB, 7f56-a1-m1-cD_7f56-a1-m1-cC
16 7f56-a1-m1-cB 831 36 0.3243 0.0144 0.3333 3.4 7f56-a1-m1-cA_7f56-a1-m1-cB, 7f56-a1-m1-cB_7f56-a1-m1-cC, 7f56-a1-m1-cD_7f56-a1-m1-cB
17 7f56-a1-m1-cA 831 36 0.3243 0.0144 0.3333 3.4 7f56-a1-m1-cA_7f56-a1-m1-cB
18 7f5a-a1-m1-cC 835 36 0.3243 0.0144 0.3333 3.7 7f5a-a1-m1-cB_7f5a-a1-m1-cC, 7f5a-a1-m1-cD_7f5a-a1-m1-cC
19 7f57-a1-m1-cA 835 36 0.3243 0.0144 0.3333 3.7 7f57-a1-m1-cD_7f57-a1-m1-cA
20 7f56-a1-m1-cC 835 36 0.3243 0.0144 0.3333 3.7 7f56-a1-m1-cB_7f56-a1-m1-cC, 7f56-a1-m1-cD_7f56-a1-m1-cC
21 5kuf-a1-m1-cD 750 36 0.3243 0.0160 0.3333 3.9 5kuf-a1-m1-cA_5kuf-a1-m1-cD, 5kuf-a1-m1-cC_5kuf-a1-m1-cD
22 5kuf-a1-m1-cC 750 36 0.3243 0.0160 0.3333 3.9 5kuf-a1-m1-cC_5kuf-a1-m1-cD
23 5kuf-a1-m1-cA 750 36 0.3243 0.0160 0.3333 3.9 5kuf-a1-m1-cA_5kuf-a1-m1-cD
24 4uqq-a1-m1-cC 693 36 0.3243 0.0173 0.3333 4.0 4uqq-a1-m1-cD_4uqq-a1-m1-cC
25 4uqq-a1-m1-cA 693 36 0.3243 0.0173 0.3333 4.0 4uqq-a1-m1-cD_4uqq-a1-m1-cA
26 7ks3-a1-m1-cD 728 36 0.3243 0.0165 0.3333 4.1 7ks3-a1-m1-cB_7ks3-a1-m1-cD
27 7ks3-a1-m1-cB 728 36 0.3243 0.0165 0.3333 4.1 7ks3-a1-m1-cB_7ks3-a1-m1-cD
28 4uqq-a1-m1-cD 688 36 0.3243 0.0174 0.3333 4.2 4uqq-a1-m1-cB_4uqq-a1-m1-cD, 4uqq-a1-m1-cD_4uqq-a1-m1-cA, 4uqq-a1-m1-cD_4uqq-a1-m1-cC
29 4uqq-a1-m1-cB 688 36 0.3243 0.0174 0.3333 4.2 4uqq-a1-m1-cB_4uqq-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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