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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
IDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRRYSDAE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4jol-a2-m1-cD 60 60 1.0000 1.0000 1.0000 1.51e-38 4jol-a2-m1-cB_4jol-a2-m1-cD
2 4jol-a2-m1-cB 60 60 1.0000 1.0000 1.0000 1.51e-38 4jol-a2-m1-cB_4jol-a2-m1-cD
3 1wq6-a1-m2-cB 57 59 0.9333 0.9825 0.9492 7.76e-33 1wq6-a1-m1-cA_1wq6-a1-m2-cB, 1wq6-a1-m2-cA_1wq6-a1-m2-cB
4 1wq6-a1-m2-cA 57 59 0.9333 0.9825 0.9492 7.76e-33 1wq6-a1-m2-cA_1wq6-a1-m2-cB
5 1wq6-a1-m1-cA 57 59 0.9333 0.9825 0.9492 7.76e-33 1wq6-a1-m1-cA_1wq6-a1-m2-cB
6 6jvv-a1-m1-cB 266 22 0.1500 0.0338 0.4091 8.3 6jvv-a1-m1-cA_6jvv-a1-m1-cB
7 5yf1-a1-m1-cB 350 22 0.1500 0.0257 0.4091 8.8 5yf1-a1-m1-cA_5yf1-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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