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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
IDIQQGNVVTQDMIDQLRPGMTRRQVRFIMGNPLIVDTFHANRWDYLYSIQPGGGRRQQE
RVSLFFNDSDQLAGLNGDFMPGVSRDEA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7jrk-a1-m1-cB 88 88 1.0000 1.0000 1.0000 5.33e-61 7jrk-a1-m1-cA_7jrk-a1-m1-cB
2 7jrk-a1-m1-cA 88 88 1.0000 1.0000 1.0000 5.33e-61 7jrk-a1-m1-cA_7jrk-a1-m1-cB
3 5wam-a1-m2-cB 97 68 0.2614 0.2371 0.3382 3.88e-13 5wam-a1-m2-cB_5wam-a1-m1-cA, 5wam-a1-m2-cB_5wam-a1-m2-cA
4 5wam-a1-m2-cA 103 68 0.2614 0.2233 0.3382 4.52e-13 5wam-a1-m1-cA_5wam-a1-m2-cA, 5wam-a1-m2-cB_5wam-a1-m2-cA
5 5wam-a1-m1-cA 103 68 0.2614 0.2233 0.3382 4.52e-13 5wam-a1-m1-cA_5wam-a1-m2-cA, 5wam-a1-m2-cB_5wam-a1-m1-cA
6 2yh9-a1-m2-cC 65 63 0.2500 0.3385 0.3492 7.56e-06 2yh9-a1-m2-cA_2yh9-a1-m2-cC, 2yh9-a1-m2-cC_2yh9-a1-m2-cB
7 2yh9-a1-m2-cB 66 63 0.2500 0.3333 0.3492 7.80e-06 2yh9-a1-m2-cA_2yh9-a1-m2-cB, 2yh9-a1-m2-cC_2yh9-a1-m2-cB
8 2yh9-a1-m2-cA 64 63 0.2500 0.3438 0.3492 8.07e-06 2yh9-a1-m2-cA_2yh9-a1-m2-cB, 2yh9-a1-m2-cA_2yh9-a1-m2-cC
9 3giu-a1-m1-cA 209 68 0.1932 0.0813 0.2500 4.0 3giu-a1-m1-cA_3giu-a1-m1-cB
10 3giu-a1-m1-cB 210 68 0.1932 0.0810 0.2500 4.1 3giu-a1-m1-cA_3giu-a1-m1-cB
11 3vz0-a2-m1-cD 445 34 0.1364 0.0270 0.3529 7.1 3vz0-a2-m1-cC_3vz0-a2-m1-cD
12 3vz0-a2-m1-cC 445 34 0.1364 0.0270 0.3529 7.1 3vz0-a2-m1-cC_3vz0-a2-m1-cD
13 1qmg-a2-m1-cC 512 66 0.2045 0.0352 0.2727 7.4 1qmg-a2-m1-cC_1qmg-a2-m1-cD
14 1qmg-a2-m1-cD 513 66 0.2045 0.0351 0.2727 7.6 1qmg-a2-m1-cC_1qmg-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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