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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=35)
IEAKAKKILEDYDKQLQHLKKQVEEAKKDFEEWEK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5cwt-a2-m1-cC 40 35 1.0000 0.8750 1.0000 3.37e-17 5cwt-a2-m1-cD_5cwt-a2-m1-cC
2 5cwt-a2-m1-cD 35 35 1.0000 1.0000 1.0000 3.97e-17 5cwt-a2-m1-cD_5cwt-a2-m1-cC
3 6edi-a1-m1-cB 394 25 0.2857 0.0254 0.4000 0.86 6edi-a1-m1-cA_6edi-a1-m1-cB
4 6edi-a1-m1-cA 394 25 0.2857 0.0254 0.4000 0.86 6edi-a1-m1-cA_6edi-a1-m1-cB
5 8dk3-a1-m1-cB 450 27 0.2571 0.0200 0.3333 1.5 8dk3-a1-m1-cB_8dk3-a1-m1-cA
6 4hgv-a1-m1-cC 400 29 0.3143 0.0275 0.3793 1.6 4hgv-a1-m1-cC_4hgv-a1-m1-cD
7 4hgv-a1-m1-cD 443 29 0.3143 0.0248 0.3793 1.6 4hgv-a1-m1-cB_4hgv-a1-m1-cD, 4hgv-a1-m1-cC_4hgv-a1-m1-cD, 4hgv-a1-m1-cD_4hgv-a1-m1-cA
8 4hgv-a1-m1-cA 446 29 0.3143 0.0247 0.3793 1.6 4hgv-a1-m1-cD_4hgv-a1-m1-cA
9 4hgv-a1-m1-cB 443 29 0.3143 0.0248 0.3793 1.8 4hgv-a1-m1-cB_4hgv-a1-m1-cD
10 3mxq-a1-m1-cC 122 38 0.3143 0.0902 0.2895 3.7 3mxq-a1-m1-cD_3mxq-a1-m1-cC
11 3mxq-a1-m1-cA 123 38 0.3143 0.0894 0.2895 3.8 3mxq-a1-m1-cD_3mxq-a1-m1-cA
12 8dk3-a1-m1-cA 455 23 0.2571 0.0198 0.3913 3.9 8dk3-a1-m1-cB_8dk3-a1-m1-cA
13 5dqr-a1-m1-cC 421 19 0.2286 0.0190 0.4211 5.6 5dqr-a1-m1-cA_5dqr-a1-m1-cC
14 5dqr-a1-m1-cA 414 19 0.2286 0.0193 0.4211 6.2 5dqr-a1-m1-cA_5dqr-a1-m1-cC
15 6wt5-a2-m1-cD 134 26 0.2571 0.0672 0.3462 6.5 6wt5-a2-m1-cD_6wt5-a2-m1-cC
16 1ebu-a2-m1-cD 358 20 0.2857 0.0279 0.5000 8.4 1ebu-a2-m1-cC_1ebu-a2-m1-cD
17 1ebu-a2-m1-cC 358 20 0.2857 0.0279 0.5000 8.4 1ebu-a2-m1-cC_1ebu-a2-m1-cD
18 6wt5-a2-m1-cC 150 26 0.2571 0.0600 0.3462 9.1 6wt5-a2-m1-cD_6wt5-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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