HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=98)
IEIRKHLESQPVYIFTSLAGGMQVILRSNNLAAILQGNGIKFEYRDLGTDEEAKKIWKRQ
ANGKTLPGVVRGDDYIGNWQEIEDANEEYRLRELLYET

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	6m4c-a1-m2-cA	98	98	1.0000	1.0000	1.0000	7.48e-69	6m4c-a1-m1-cA_6m4c-a1-m2-cA
2	6m4c-a1-m1-cA	98	98	1.0000	1.0000	1.0000	7.48e-69	6m4c-a1-m1-cA_6m4c-a1-m2-cA
3	6abr-a1-m1-cA	96	96	0.6122	0.6250	0.6250	8.38e-38	6abr-a1-m1-cB_6abr-a1-m1-cA
4	6abs-a1-m1-cA	98	98	0.5816	0.5816	0.5816	3.49e-35	6abs-a1-m1-cB_6abs-a1-m1-cA
5	6abs-a1-m1-cB	95	98	0.5816	0.6000	0.5816	4.85e-35	6abs-a1-m1-cB_6abs-a1-m1-cA
6	6abr-a1-m1-cB	85	89	0.5510	0.6353	0.6067	4.47e-34	6abr-a1-m1-cB_6abr-a1-m1-cA
7	8ihp-a1-m1-cJ	417	34	0.1327	0.0312	0.3824	1.5	8ihp-a1-m1-cG_8ihp-a1-m1-cJ
8	8ihp-a1-m1-cG	417	34	0.1327	0.0312	0.3824	1.5	8ihp-a1-m1-cG_8ihp-a1-m1-cJ
9	5ed4-a2-m1-cF	214	28	0.1020	0.0467	0.3571	2.0	5ed4-a2-m1-cF_5ed4-a2-m1-cE
10	3fmc-a1-m1-cD	358	39	0.1327	0.0363	0.3333	4.5	3fmc-a1-m1-cA_3fmc-a1-m1-cD, 3fmc-a1-m1-cB_3fmc-a1-m1-cD, 3fmc-a1-m1-cD_3fmc-a1-m1-cC
11	3fmc-a1-m1-cB	358	39	0.1327	0.0363	0.3333	4.5	3fmc-a1-m1-cB_3fmc-a1-m1-cD
12	3fmc-a1-m1-cA	358	39	0.1327	0.0363	0.3333	4.5	3fmc-a1-m1-cA_3fmc-a1-m1-cD
13	3fmc-a1-m1-cC	359	39	0.1327	0.0362	0.3333	4.8	3fmc-a1-m1-cD_3fmc-a1-m1-cC
14	2wci-a1-m2-cB	112	97	0.1735	0.1518	0.1753	5.9	2wci-a1-m2-cB_2wci-a1-m1-cA
15	2wci-a1-m1-cA	113	97	0.1735	0.1504	0.1753	6.0	2wci-a1-m2-cB_2wci-a1-m1-cA
16	3hte-a1-m1-cC	283	55	0.1531	0.0530	0.2727	6.3	3hte-a1-m1-cC_3hte-a1-m1-cB
17	4i63-a1-m1-cB	307	55	0.1531	0.0489	0.2727	6.5	4i63-a1-m1-cB_4i63-a1-m1-cA
18	4i63-a1-m1-cA	311	55	0.1531	0.0482	0.2727	7.0	4i63-a1-m1-cB_4i63-a1-m1-cA
19	6wsg-a1-m1-cA	301	54	0.1531	0.0498	0.2778	7.3	6wsg-a1-m1-cA_6wsg-a1-m1-cB, 6wsg-a1-m1-cA_6wsg-a1-m1-cF
20	3hte-a1-m1-cF	293	54	0.1531	0.0512	0.2778	7.7	3hte-a1-m1-cF_3hte-a1-m1-cA
21	3hte-a1-m1-cB	309	55	0.1531	0.0485	0.2727	7.8	3hte-a1-m1-cB_3hte-a1-m1-cA, 3hte-a1-m1-cC_3hte-a1-m1-cB
22	3rot-a2-m2-cB	268	25	0.1224	0.0448	0.4800	7.9	3rot-a2-m1-cA_3rot-a2-m2-cB
23	3rot-a2-m1-cA	268	25	0.1224	0.0448	0.4800	7.9	3rot-a2-m1-cA_3rot-a2-m2-cB
24	3rot-a1-m1-cB	268	25	0.1224	0.0448	0.4800	7.9	3rot-a1-m1-cA_3rot-a1-m1-cB
25	3rot-a1-m1-cA	268	25	0.1224	0.0448	0.4800	7.9	3rot-a1-m1-cA_3rot-a1-m1-cB
26	6wsg-a1-m1-cF	331	54	0.1531	0.0453	0.2778	8.6	6wsg-a1-m1-cA_6wsg-a1-m1-cF
27	3hte-a1-m1-cA	317	54	0.1531	0.0473	0.2778	9.0	3hte-a1-m1-cB_3hte-a1-m1-cA, 3hte-a1-m1-cF_3hte-a1-m1-cA
28	6wsg-a1-m1-cB	334	54	0.1531	0.0449	0.2778	9.0	6wsg-a1-m1-cA_6wsg-a1-m1-cB
29	6pp5-a1-m1-cE	348	54	0.1531	0.0431	0.2778	9.8	6pp5-a1-m1-cD_6pp5-a1-m1-cE

[Back]

Reference:
Jacob Schwartz et al.