Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=99)
IFMRKVVAEVSIIPLGKGASVSKYVKKAIEVFKKYDLKVETNAMGTVLEGDLDEILKAFK
EAHSTVLNDVDRVVSSLKIDERKDKENTIERKLKAIGEL

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 2eky-a1-m1-cB 100 99 1.0000 0.9900 1.0000 1.01e-65 2eky-a1-m1-cC_2eky-a1-m1-cB
2 2eky-a1-m1-cC 99 99 1.0000 1.0000 1.0000 1.23e-65 2eky-a1-m1-cC_2eky-a1-m1-cB
3 2eky-a2-m1-cE 98 98 0.9899 1.0000 1.0000 4.27e-65 2eky-a2-m1-cG_2eky-a2-m1-cE
4 2eky-a2-m1-cH 96 96 0.9697 1.0000 1.0000 2.41e-63 2eky-a2-m1-cG_2eky-a2-m1-cH
5 2eky-a2-m1-cG 96 96 0.9697 1.0000 1.0000 2.41e-63 2eky-a2-m1-cG_2eky-a2-m1-cE, 2eky-a2-m1-cG_2eky-a2-m1-cH
6 1lxn-a6-m2-cC 96 96 0.4141 0.4271 0.4271 3.00e-15 1lxn-a6-m2-cB_1lxn-a6-m2-cC
7 1lxn-a6-m2-cB 96 96 0.4141 0.4271 0.4271 3.00e-15 1lxn-a6-m1-cA_1lxn-a6-m2-cB, 1lxn-a6-m2-cB_1lxn-a6-m2-cC
8 1lxn-a6-m1-cA 96 96 0.4141 0.4271 0.4271 3.00e-15 1lxn-a6-m1-cA_1lxn-a6-m2-cB
9 1lxn-a5-m1-cD 96 96 0.4141 0.4271 0.4271 3.00e-15 1lxn-a5-m1-cB_1lxn-a5-m1-cD, 1lxn-a5-m1-cC_1lxn-a5-m1-cD
10 1lxn-a5-m1-cC 96 96 0.4141 0.4271 0.4271 3.00e-15 1lxn-a5-m1-cC_1lxn-a5-m1-cD
11 1lxn-a5-m1-cB 96 96 0.4141 0.4271 0.4271 3.00e-15 1lxn-a5-m1-cB_1lxn-a5-m1-cD
12 1yqh-a1-m2-cB 98 88 0.3030 0.3061 0.3409 1.37e-06 1yqh-a1-m1-cB_1yqh-a1-m2-cB, 1yqh-a1-m2-cB_1yqh-a1-m2-cA
13 1yqh-a1-m1-cB 98 88 0.3030 0.3061 0.3409 1.37e-06 1yqh-a1-m1-cB_1yqh-a1-m2-cB
14 1yqh-a1-m2-cA 101 88 0.3030 0.2970 0.3409 1.76e-06 1yqh-a1-m2-cB_1yqh-a1-m2-cA
15 1lxj-a1-m4-cA 101 91 0.2121 0.2079 0.2308 0.50 1lxj-a1-m1-cA_1lxj-a1-m4-cA, 1lxj-a1-m2-cA_1lxj-a1-m4-cA, 1lxj-a1-m3-cA_1lxj-a1-m4-cA
16 1lxj-a1-m3-cA 101 91 0.2121 0.2079 0.2308 0.50 1lxj-a1-m3-cA_1lxj-a1-m4-cA
17 1lxj-a1-m2-cA 101 91 0.2121 0.2079 0.2308 0.50 1lxj-a1-m2-cA_1lxj-a1-m4-cA
18 1lxj-a1-m1-cA 101 91 0.2121 0.2079 0.2308 0.50 1lxj-a1-m1-cA_1lxj-a1-m4-cA
19 3zvk-a1-m1-cE 57 31 0.1313 0.2281 0.4194 3.2 3zvk-a1-m1-cE_3zvk-a1-m1-cH
20 3zvk-a1-m1-cH 57 31 0.1313 0.2281 0.4194 3.2 3zvk-a1-m1-cE_3zvk-a1-m1-cH
21 2xci-a2-m1-cD 352 54 0.2020 0.0568 0.3704 3.8 2xci-a2-m1-cB_2xci-a2-m1-cD
22 2xci-a2-m1-cB 352 54 0.2020 0.0568 0.3704 3.8 2xci-a2-m1-cB_2xci-a2-m1-cD
23 6rla-a1-m1-cB 2750 31 0.1313 0.0047 0.4194 3.9 6rla-a1-m1-cA_6rla-a1-m1-cB
24 6rla-a1-m1-cA 2750 31 0.1313 0.0047 0.4194 3.9 6rla-a1-m1-cA_6rla-a1-m1-cB
25 2sas-a1-m2-cA 185 52 0.1414 0.0757 0.2692 4.7 2sas-a1-m1-cA_2sas-a1-m2-cA
26 2sas-a1-m1-cA 185 52 0.1414 0.0757 0.2692 4.7 2sas-a1-m1-cA_2sas-a1-m2-cA
27 6nyy-a1-m1-cD 491 28 0.1212 0.0244 0.4286 5.0 6nyy-a1-m1-cC_6nyy-a1-m1-cD
28 6nyy-a1-m1-cC 491 28 0.1212 0.0244 0.4286 5.0 6nyy-a1-m1-cC_6nyy-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600