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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
IGRTCWAIAEGYIPPETVCILNAGDEDAHVEITIYYSDKEPVGPYRLTVPARRTKHVRFN
DLNDPAPIPHDTDFASVIQSNVPIVVQHT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ii7-a1-m1-cH 106 89 1.0000 0.8396 1.0000 1.80e-63 2ii7-a1-m1-cH_2ii7-a1-m1-cA
2 2iia-a1-m4-cA 89 89 1.0000 1.0000 1.0000 9.75e-63 2iia-a1-m2-cA_2iia-a1-m4-cA
3 2iia-a1-m2-cA 89 89 1.0000 1.0000 1.0000 9.75e-63 2iia-a1-m2-cA_2iia-a1-m4-cA
4 2ii7-a1-m1-cA 112 94 1.0000 0.7946 0.9468 5.22e-61 2ii7-a1-m1-cH_2ii7-a1-m1-cA
5 1nc7-a1-m1-cC 110 93 0.3483 0.2818 0.3333 1.09e-06 1nc7-a1-m1-cC_1nc7-a1-m1-cD
6 1nc7-a1-m1-cD 111 93 0.3483 0.2793 0.3333 1.25e-06 1nc7-a1-m1-cC_1nc7-a1-m1-cD
7 6vg1-a1-m1-cB 641 79 0.2697 0.0374 0.3038 0.42 6vg1-a1-m1-cB_6vg1-a1-m1-cA
8 6vg1-a1-m1-cA 642 79 0.2697 0.0374 0.3038 0.42 6vg1-a1-m1-cB_6vg1-a1-m1-cA
9 7n86-a2-m1-cC 210 54 0.1910 0.0810 0.3148 3.9 7n86-a2-m1-cC_7n86-a2-m1-cD
10 2ivo-a1-m2-cB 325 18 0.1236 0.0338 0.6111 4.8 2ivo-a1-m2-cA_2ivo-a1-m2-cB
11 2ivo-a1-m2-cA 325 18 0.1236 0.0338 0.6111 4.8 2ivo-a1-m1-cA_2ivo-a1-m2-cA, 2ivo-a1-m2-cA_2ivo-a1-m2-cB
12 2ivo-a1-m1-cA 325 18 0.1236 0.0338 0.6111 4.8 2ivo-a1-m1-cA_2ivo-a1-m2-cA
13 3alx-a1-m1-cB 526 53 0.1685 0.0285 0.2830 6.8 3alx-a1-m1-cA_3alx-a1-m1-cB
14 3alx-a1-m1-cA 515 53 0.1685 0.0291 0.2830 7.6 3alx-a1-m1-cA_3alx-a1-m1-cB, 3alx-a1-m1-cD_3alx-a1-m1-cA
15 3alx-a1-m1-cD 504 53 0.1685 0.0298 0.2830 8.1 3alx-a1-m1-cD_3alx-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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