Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
IHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVND
ITPENLHENIDWGEP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ub4-a1-m2-cC 75 75 1.0000 1.0000 1.0000 9.23e-50 1ub4-a1-m1-cC_1ub4-a1-m2-cC
2 1ub4-a1-m1-cC 75 75 1.0000 1.0000 1.0000 9.23e-50 1ub4-a1-m1-cC_1ub4-a1-m2-cC
3 2mrn-a1-m1-cB 67 49 0.6533 0.7313 1.0000 1.34e-29 2mrn-a1-m1-cA_2mrn-a1-m1-cB
4 2mrn-a1-m1-cA 67 49 0.6533 0.7313 1.0000 1.34e-29 2mrn-a1-m1-cA_2mrn-a1-m1-cB
5 7d2q-a1-m1-cF 30 22 0.1600 0.4000 0.5455 0.009 7d2q-a1-m1-cD_7d2q-a1-m1-cF
6 7d2q-a1-m1-cD 30 22 0.1600 0.4000 0.5455 0.009 7d2q-a1-m1-cD_7d2q-a1-m1-cF
7 3aql-a1-m1-cB 388 26 0.1733 0.0335 0.5000 0.56 3aql-a1-m1-cA_3aql-a1-m1-cB
8 3aql-a1-m1-cA 388 26 0.1733 0.0335 0.5000 0.56 3aql-a1-m1-cA_3aql-a1-m1-cB
9 2q3t-a1-m2-cA 121 31 0.1467 0.0909 0.3548 1.8 2q3t-a1-m1-cA_2q3t-a1-m2-cA
10 2q3t-a1-m1-cA 121 31 0.1467 0.0909 0.3548 1.8 2q3t-a1-m1-cA_2q3t-a1-m2-cA
11 4ad9-a2-m1-cE 284 23 0.1867 0.0493 0.6087 5.4 4ad9-a2-m1-cE_4ad9-a2-m1-cF
12 3u1k-a2-m1-cD 614 18 0.1067 0.0130 0.4444 6.5 3u1k-a2-m1-cD_3u1k-a2-m1-cB
13 3u1k-a2-m1-cB 617 18 0.1067 0.0130 0.4444 6.5 3u1k-a2-m1-cD_3u1k-a2-m1-cB
14 5zf6-a1-m1-cB 548 18 0.1067 0.0146 0.4444 6.7 5zf6-a1-m1-cB_5zf6-a1-m1-cA
15 3u1k-a1-m3-cA 619 18 0.1067 0.0129 0.4444 6.7 3u1k-a1-m2-cA_3u1k-a1-m3-cA
16 3u1k-a1-m2-cA 619 18 0.1067 0.0129 0.4444 6.7 3u1k-a1-m2-cA_3u1k-a1-m3-cA
17 5zf6-a1-m1-cA 560 18 0.1067 0.0143 0.4444 6.9 5zf6-a1-m1-cB_5zf6-a1-m1-cA
18 5j9r-a1-m1-cD 317 53 0.1867 0.0442 0.2642 7.8 5j9r-a1-m1-cA_5j9r-a1-m1-cD, 5j9r-a1-m1-cB_5j9r-a1-m1-cD, 5j9r-a1-m1-cC_5j9r-a1-m1-cD
19 5j9r-a1-m1-cC 317 53 0.1867 0.0442 0.2642 7.8 5j9r-a1-m1-cC_5j9r-a1-m1-cD
20 5j9r-a1-m1-cB 317 53 0.1867 0.0442 0.2642 7.8 5j9r-a1-m1-cB_5j9r-a1-m1-cD
21 5j9r-a1-m1-cA 317 53 0.1867 0.0442 0.2642 7.8 5j9r-a1-m1-cA_5j9r-a1-m1-cD
22 4ad9-a2-m1-cF 285 23 0.1867 0.0491 0.6087 8.6 4ad9-a2-m1-cE_4ad9-a2-m1-cF
23 3t32-a1-m1-cB 353 26 0.1600 0.0340 0.4615 8.9 3t32-a1-m1-cA_3t32-a1-m1-cB
24 3t32-a1-m1-cA 353 26 0.1600 0.0340 0.4615 8.9 3t32-a1-m1-cA_3t32-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600