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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
IITVTLNEKYNFLGISIVGQSNERGDGGIYIGSIKGGAVAADGRIEPGDLLQVNDINFEN
SNDDAVRVLRDIVHKPGPIVLTVAKLEH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1l6o-a1-m1-cB 88 88 1.0000 1.0000 1.0000 7.15e-59 1l6o-a1-m1-cB_1l6o-a1-m1-cA
2 1l6o-a1-m1-cA 90 88 1.0000 0.9778 1.0000 9.99e-59 1l6o-a1-m1-cB_1l6o-a1-m1-cA, 1l6o-a1-m1-cC_1l6o-a1-m1-cA
3 2f0a-a5-m1-cA 87 87 0.9886 1.0000 1.0000 1.02e-57 2f0a-a5-m1-cC_2f0a-a5-m1-cA
4 1l6o-a1-m1-cC 87 87 0.9886 1.0000 1.0000 1.02e-57 1l6o-a1-m1-cC_1l6o-a1-m1-cA
5 2f0a-a5-m1-cC 80 85 0.9091 1.0000 0.9412 7.88e-50 2f0a-a5-m1-cC_2f0a-a5-m1-cA
6 3fy5-a2-m2-cB 80 84 0.8977 0.9875 0.9405 1.08e-49 3fy5-a2-m1-cB_3fy5-a2-m2-cB
7 3fy5-a2-m1-cB 80 84 0.8977 0.9875 0.9405 1.08e-49 3fy5-a2-m1-cB_3fy5-a2-m2-cB
8 3cbx-a1-m1-cA 105 89 0.9545 0.8000 0.9438 6.83e-49 3cbx-a1-m1-cB_3cbx-a1-m1-cA
9 3cc0-a1-m1-cA 106 89 0.9545 0.7925 0.9438 1.17e-48 3cc0-a1-m1-cC_3cc0-a1-m1-cA
10 3cc0-a1-m1-cB 103 87 0.8523 0.7282 0.8621 5.98e-44 3cc0-a1-m1-cC_3cc0-a1-m1-cB
11 3cby-a1-m1-cB 98 89 0.9091 0.8163 0.8989 3.01e-43 3cby-a1-m1-cB_3cby-a1-m1-cA
12 2rey-a1-m2-cA 91 89 0.8750 0.8462 0.8652 6.00e-43 2rey-a1-m1-cA_2rey-a1-m2-cA
13 2rey-a1-m1-cA 91 89 0.8750 0.8462 0.8652 6.00e-43 2rey-a1-m1-cA_2rey-a1-m2-cA
14 3cc0-a1-m1-cC 98 88 0.8864 0.7959 0.8864 9.84e-43 3cc0-a1-m1-cC_3cc0-a1-m1-cA, 3cc0-a1-m1-cC_3cc0-a1-m1-cB
15 3cbx-a1-m1-cB 99 89 0.8977 0.7980 0.8876 1.50e-42 3cbx-a1-m1-cB_3cbx-a1-m1-cA
16 3cby-a1-m1-cA 101 89 0.8864 0.7723 0.8764 1.95e-41 3cby-a1-m1-cB_3cby-a1-m1-cA
17 3lny-a1-m6-cA 94 81 0.3750 0.3511 0.4074 1.67e-05 3lny-a1-m3-cA_3lny-a1-m6-cA, 3lny-a1-m5-cA_3lny-a1-m6-cA
18 3lny-a1-m5-cA 94 81 0.3750 0.3511 0.4074 1.67e-05 3lny-a1-m5-cA_3lny-a1-m6-cA
19 3lny-a1-m3-cA 94 81 0.3750 0.3511 0.4074 1.67e-05 3lny-a1-m3-cA_3lny-a1-m6-cA
20 7qcr-a1-m1-cB 86 52 0.2955 0.3023 0.5000 2.63e-05 7qcr-a1-m1-cB_7qcr-a1-m1-cA
21 7qcr-a1-m1-cA 87 52 0.2955 0.2989 0.5000 3.31e-05 7qcr-a1-m1-cB_7qcr-a1-m1-cA
22 3axa-a2-m3-cB 97 53 0.3068 0.2784 0.5094 7.06e-05 3axa-a2-m1-cB_3axa-a2-m3-cB
23 3axa-a2-m1-cB 97 53 0.3068 0.2784 0.5094 7.06e-05 3axa-a2-m1-cB_3axa-a2-m3-cB
24 4amh-a1-m1-cB 92 78 0.3409 0.3261 0.3846 9.20e-05 4amh-a1-m1-cB_4amh-a1-m1-cA
25 4amh-a1-m1-cA 94 78 0.3409 0.3191 0.3846 1.27e-04 4amh-a1-m1-cB_4amh-a1-m1-cA
26 2x7z-a1-m2-cA 99 65 0.2955 0.2626 0.4000 1.37e-04 2x7z-a1-m1-cA_2x7z-a1-m2-cA
27 2x7z-a1-m1-cA 99 65 0.2955 0.2626 0.4000 1.37e-04 2x7z-a1-m1-cA_2x7z-a1-m2-cA
28 6nek-a1-m2-cA 86 73 0.3068 0.3140 0.3699 1.42e-04 6nek-a1-m1-cA_6nek-a1-m2-cA
29 6nek-a1-m1-cA 86 73 0.3068 0.3140 0.3699 1.42e-04 6nek-a1-m1-cA_6nek-a1-m2-cA
30 3rl8-a1-m1-cC 95 65 0.2955 0.2737 0.4000 2.11e-04 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cC, 3rl8-a1-m1-cD_3rl8-a1-m1-cC
31 3rl8-a1-m1-cD 94 65 0.2955 0.2766 0.4000 2.25e-04 3rl8-a1-m1-cD_3rl8-a1-m1-cC, 3rl8-a1-m1-cE_3rl8-a1-m1-cD
32 3rl8-a1-m1-cA 94 65 0.2955 0.2766 0.4000 2.25e-04 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cA
33 3rl8-a1-m1-cE 90 65 0.2955 0.2889 0.4000 2.63e-04 3rl8-a1-m1-cE_3rl8-a1-m1-cD
34 3rl8-a1-m1-cB 90 65 0.2955 0.2889 0.4000 2.63e-04 3rl8-a1-m1-cB_3rl8-a1-m1-cA, 3rl8-a1-m1-cB_3rl8-a1-m1-cC
35 3zrt-a1-m1-cA 197 65 0.3068 0.1371 0.4154 8.33e-04 3zrt-a1-m1-cC_3zrt-a1-m1-cA
36 3zrt-a1-m1-cA 197 74 0.2955 0.1320 0.3514 0.41 3zrt-a1-m1-cC_3zrt-a1-m1-cA
37 7mfw-a2-m1-cA 93 94 0.4205 0.3978 0.3936 8.62e-04 7mfw-a2-m1-cA_7mfw-a2-m2-cB
38 7mfw-a1-m1-cA 93 94 0.4205 0.3978 0.3936 8.62e-04 7mfw-a1-m1-cA_7mfw-a1-m1-cB
39 7mfw-a2-m2-cB 98 94 0.4205 0.3776 0.3936 0.001 7mfw-a2-m1-cA_7mfw-a2-m2-cB
40 7mfw-a1-m1-cB 98 94 0.4205 0.3776 0.3936 0.001 7mfw-a1-m1-cA_7mfw-a1-m1-cB
41 2xkx-a1-m1-cB 718 65 0.3068 0.0376 0.4154 0.001 2xkx-a1-m1-cB_2xkx-a1-m1-cA
42 2xkx-a1-m1-cB 718 74 0.2955 0.0362 0.3514 0.65 2xkx-a1-m1-cB_2xkx-a1-m1-cA
43 2xkx-a1-m1-cA 721 65 0.3068 0.0374 0.4154 0.001 2xkx-a1-m1-cB_2xkx-a1-m1-cA
44 2xkx-a1-m1-cA 721 74 0.2955 0.0361 0.3514 0.66 2xkx-a1-m1-cB_2xkx-a1-m1-cA
45 3zrt-a1-m1-cC 188 65 0.3068 0.1436 0.4154 0.001 3zrt-a1-m1-cC_3zrt-a1-m1-cA
46 3zrt-a1-m1-cC 188 74 0.2955 0.1383 0.3514 0.61 3zrt-a1-m1-cC_3zrt-a1-m1-cA
47 5glj-a1-m1-cD 96 75 0.2955 0.2708 0.3467 0.002 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cD
48 5glj-a1-m1-cA 96 75 0.2955 0.2708 0.3467 0.002 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cA
49 5glj-a1-m1-cB 93 75 0.2955 0.2796 0.3467 0.002 5glj-a1-m1-cB_5glj-a1-m1-cA, 5glj-a1-m1-cB_5glj-a1-m1-cD
50 3b76-a1-m1-cA 101 62 0.2727 0.2376 0.3871 0.004 3b76-a1-m1-cA_3b76-a1-m1-cB
51 3b76-a1-m1-cB 102 62 0.2727 0.2353 0.3871 0.005 3b76-a1-m1-cA_3b76-a1-m1-cB
52 4h11-a3-m2-cA 102 74 0.3182 0.2745 0.3784 0.006 4h11-a3-m1-cB_4h11-a3-m2-cA
53 4h11-a3-m1-cB 102 74 0.3182 0.2745 0.3784 0.006 4h11-a3-m1-cB_4h11-a3-m2-cA
54 2wl7-a1-m3-cA 96 74 0.3182 0.2917 0.3784 0.006 2wl7-a1-m2-cA_2wl7-a1-m3-cA
55 2wl7-a1-m2-cA 96 74 0.3182 0.2917 0.3784 0.006 2wl7-a1-m2-cA_2wl7-a1-m3-cA
56 4q2n-a3-m1-cF 98 62 0.2727 0.2449 0.3871 0.50 4q2n-a3-m1-cE_4q2n-a3-m1-cF
57 2i1n-a4-m3-cA 101 65 0.2841 0.2475 0.3846 1.1 2i1n-a4-m3-cA_2i1n-a4-m3-cB
58 2i1n-a4-m1-cA 101 65 0.2841 0.2475 0.3846 1.1 2i1n-a4-m1-cA_2i1n-a4-m3-cB
59 2i1n-a3-m1-cA 101 65 0.2841 0.2475 0.3846 1.1 2i1n-a3-m1-cA_2i1n-a3-m2-cB
60 2i1n-a4-m3-cB 102 65 0.2841 0.2451 0.3846 1.1 2i1n-a4-m1-cA_2i1n-a4-m3-cB, 2i1n-a4-m1-cB_2i1n-a4-m3-cB, 2i1n-a4-m3-cA_2i1n-a4-m3-cB
61 2i1n-a4-m1-cB 102 65 0.2841 0.2451 0.3846 1.1 2i1n-a4-m1-cB_2i1n-a4-m3-cB
62 2i1n-a3-m2-cB 102 65 0.2841 0.2451 0.3846 1.1 2i1n-a3-m1-cA_2i1n-a3-m2-cB
63 5ocs-a3-m1-cC 369 55 0.2159 0.0515 0.3455 1.4 5ocs-a3-m1-cC_5ocs-a3-m3-cD
64 5ocs-a3-m3-cD 371 55 0.2159 0.0512 0.3455 1.4 5ocs-a3-m1-cC_5ocs-a3-m3-cD
65 2zpl-a4-m1-cC 88 41 0.1705 0.1705 0.3659 2.8 2zpl-a4-m1-cC_2zpl-a4-m1-cB
66 2zpl-a4-m1-cA 91 41 0.1705 0.1648 0.3659 3.2 2zpl-a4-m1-cA_2zpl-a4-m1-cB
67 5vwi-a1-m1-cB 87 59 0.2159 0.2184 0.3220 3.3 5vwi-a1-m1-cB_5vwi-a1-m1-cA
68 2zpl-a4-m1-cB 93 41 0.1705 0.1613 0.3659 3.5 2zpl-a4-m1-cA_2zpl-a4-m1-cB, 2zpl-a4-m1-cC_2zpl-a4-m1-cB
69 3tsw-a5-m1-cB 194 49 0.1932 0.0876 0.3469 4.3 3tsw-a5-m1-cB_3tsw-a5-m1-cD
70 3tsw-a5-m1-cD 199 49 0.1932 0.0854 0.3469 4.8 3tsw-a5-m1-cB_3tsw-a5-m1-cD
71 4q2q-a1-m2-cA 90 49 0.1932 0.1889 0.3469 5.2 4q2q-a1-m1-cA_4q2q-a1-m2-cA
72 4q2q-a1-m1-cA 90 49 0.1932 0.1889 0.3469 5.2 4q2q-a1-m1-cA_4q2q-a1-m2-cA
73 6mso-a2-m1-cC 528 34 0.1591 0.0265 0.4118 6.4 6mso-a2-m1-cC_6mso-a2-m1-cD
74 6mso-a2-m1-cD 531 34 0.1591 0.0264 0.4118 6.4 6mso-a2-m1-cC_6mso-a2-m1-cD
75 6jjo-a1-m2-cA 381 50 0.1705 0.0394 0.3000 8.2 6jjo-a1-m2-cA_6jjo-a1-m2-cE
76 6jjk-a1-m2-cA 381 50 0.1705 0.0394 0.3000 8.2 6jjk-a1-m2-cA_6jjk-a1-m2-cB
77 6jjo-a1-m2-cF 379 50 0.1705 0.0396 0.3000 8.6 6jjo-a1-m2-cF_6jjo-a1-m1-cE
78 3bq9-a1-m2-cB 446 66 0.2273 0.0448 0.3030 9.8 3bq9-a1-m1-cA_3bq9-a1-m2-cB, 3bq9-a1-m2-cA_3bq9-a1-m2-cB
79 3bq9-a1-m2-cA 446 66 0.2273 0.0448 0.3030 9.8 3bq9-a1-m2-cA_3bq9-a1-m2-cB
80 3bq9-a1-m1-cA 446 66 0.2273 0.0448 0.3030 9.8 3bq9-a1-m1-cA_3bq9-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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