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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
IIVSDTSKLRNELRLLKEDAATFSSLRAFAARCEEYVTQVDDLNRQLEAAEEEKKTLNQL
LRLAVQQKLALTQRLEEE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4bl6-a1-m1-cA 78 78 1.0000 1.0000 1.0000 3.95e-49 4bl6-a1-m1-cA_4bl6-a1-m1-cD, 4bl6-a1-m1-cB_4bl6-a1-m1-cA
2 4bl6-a1-m1-cD 81 77 0.9872 0.9506 1.0000 1.65e-48 4bl6-a1-m1-cA_4bl6-a1-m1-cD, 4bl6-a1-m1-cB_4bl6-a1-m1-cD
3 4bl6-a1-m1-cB 73 73 0.9359 1.0000 1.0000 1.24e-45 4bl6-a1-m1-cB_4bl6-a1-m1-cA, 4bl6-a1-m1-cB_4bl6-a1-m1-cD
4 6ofp-a1-m1-cA 91 77 0.7051 0.6044 0.7143 3.98e-33 6ofp-a1-m1-cA_6ofp-a1-m1-cB
5 6ofp-a1-m1-cB 92 77 0.7051 0.5978 0.7143 4.58e-33 6ofp-a1-m1-cA_6ofp-a1-m1-cB
6 6guw-a1-m2-cA 118 62 0.2179 0.1441 0.2742 0.63 6guw-a1-m1-cA_6guw-a1-m2-cA
7 6guw-a1-m1-cA 118 62 0.2179 0.1441 0.2742 0.63 6guw-a1-m1-cA_6guw-a1-m2-cA
8 8d38-a1-m2-cB 241 49 0.1667 0.0539 0.2653 3.1 8d38-a1-m2-cC_8d38-a1-m2-cB
9 8d38-a1-m2-cC 239 49 0.1667 0.0544 0.2653 8.4 8d38-a1-m1-cC_8d38-a1-m2-cC, 8d38-a1-m2-cC_8d38-a1-m2-cB
10 8d38-a1-m1-cC 239 49 0.1667 0.0544 0.2653 8.4 8d38-a1-m1-cC_8d38-a1-m2-cC

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Reference:
Jacob Schwartz et al.

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