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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
IKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ
T

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4v5z-a1-m1-cBv 61 61 1.0000 1.0000 1.0000 1.50e-35 4v5z-a1-m1-cB8_4v5z-a1-m1-cBv
2 3tai-a1-m1-cB 423 19 0.1967 0.0284 0.6316 1.9 3tai-a1-m1-cA_3tai-a1-m1-cB
3 3tai-a1-m1-cA 423 19 0.1967 0.0284 0.6316 1.9 3tai-a1-m1-cA_3tai-a1-m1-cB
4 1fvf-a1-m1-cB 543 34 0.2131 0.0239 0.3824 5.4 1fvf-a1-m1-cA_1fvf-a1-m1-cB
5 1fvf-a1-m1-cA 543 34 0.2131 0.0239 0.3824 5.4 1fvf-a1-m1-cA_1fvf-a1-m1-cB
6 4n40-a2-m3-cA 270 38 0.2131 0.0481 0.3421 5.6 4n40-a2-m2-cA_4n40-a2-m3-cA
7 4n40-a2-m2-cA 270 38 0.2131 0.0481 0.3421 5.6 4n40-a2-m2-cA_4n40-a2-m3-cA

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Reference:
Jacob Schwartz et al.

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