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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
IKQLVMELAENSMIEAEGLKGTLDEATQKIELGFESLSSLQVETIQAIQATDYADSIKTL
GENIKILDRSMKSMMETMRLMMEKIDLLYASTAIG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8b8b-a1-m1-cC 95 95 1.0000 1.0000 1.0000 7.72e-63 8b8b-a1-m1-cC_8b8b-a1-m1-cD
2 8b8b-a1-m1-cA 99 95 1.0000 0.9596 1.0000 1.07e-62 8b8b-a1-m1-cD_8b8b-a1-m1-cA
3 8b8b-a1-m1-cD 97 94 0.9895 0.9691 1.0000 8.80e-62 8b8b-a1-m1-cC_8b8b-a1-m1-cD, 8b8b-a1-m1-cD_8b8b-a1-m1-cA
4 8b8d-a1-m1-cD 103 98 0.4526 0.4175 0.4388 7.98e-21 8b8d-a1-m1-cA_8b8d-a1-m1-cD, 8b8d-a1-m1-cB_8b8d-a1-m1-cD, 8b8d-a1-m1-cC_8b8d-a1-m1-cD
5 8b8d-a1-m1-cA 100 93 0.4316 0.4100 0.4409 9.14e-19 8b8d-a1-m1-cA_8b8d-a1-m1-cD, 8b8d-a1-m1-cB_8b8d-a1-m1-cA
6 8b8d-a1-m1-cB 99 93 0.4316 0.4141 0.4409 9.20e-19 8b8d-a1-m1-cB_8b8d-a1-m1-cA, 8b8d-a1-m1-cB_8b8d-a1-m1-cD
7 8b8d-a1-m1-cC 101 93 0.4316 0.4059 0.4409 9.91e-19 8b8d-a1-m1-cC_8b8d-a1-m1-cD
8 1a0e-a1-m2-cD 443 57 0.1895 0.0406 0.3158 0.57 1a0e-a1-m1-cA_1a0e-a1-m2-cD, 1a0e-a1-m1-cD_1a0e-a1-m2-cD, 1a0e-a1-m2-cA_1a0e-a1-m2-cD
9 1a0e-a1-m2-cA 443 57 0.1895 0.0406 0.3158 0.57 1a0e-a1-m2-cA_1a0e-a1-m2-cD
10 1a0e-a1-m1-cD 443 57 0.1895 0.0406 0.3158 0.57 1a0e-a1-m1-cD_1a0e-a1-m2-cD
11 1a0e-a1-m1-cA 443 57 0.1895 0.0406 0.3158 0.57 1a0e-a1-m1-cA_1a0e-a1-m2-cD
12 2zf5-a2-m3-cY 494 67 0.2000 0.0385 0.2836 1.4 2zf5-a2-m2-cO_2zf5-a2-m3-cY, 2zf5-a2-m3-cO_2zf5-a2-m3-cY
13 2zf5-a2-m3-cO 494 67 0.2000 0.0385 0.2836 1.4 2zf5-a2-m3-cO_2zf5-a2-m3-cY
14 2zf5-a2-m2-cO 494 67 0.2000 0.0385 0.2836 1.4 2zf5-a2-m2-cO_2zf5-a2-m3-cY
15 5w6l-a1-m1-cA 482 77 0.2737 0.0539 0.3377 2.2 5w6l-a1-m1-cB_5w6l-a1-m1-cA
16 5w6l-a1-m1-cB 480 77 0.2737 0.0542 0.3377 2.3 5w6l-a1-m1-cB_5w6l-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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