Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
IKVCMNALCGAASTSGEWKKGWPMRSGDLASLCDKCGCAYEQSIFCEVFHAKESGWRECN
SCDKRLHCGCIASRFMMELLENGGVTCISCAKKSGLIS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5z28-a1-m1-cB 98 98 1.0000 1.0000 1.0000 5.83e-68 5z28-a1-m1-cA_5z28-a1-m1-cB
2 5z28-a1-m1-cA 96 95 0.9694 0.9896 1.0000 4.10e-66 5z28-a1-m1-cA_5z28-a1-m1-cB
3 5yug-a2-m1-cB 92 90 0.6020 0.6413 0.6556 1.98e-37 5yug-a2-m1-cB_5yug-a2-m1-cE
4 5yug-a2-m1-cE 102 90 0.6020 0.5784 0.6556 2.09e-37 5yug-a2-m1-cB_5yug-a2-m1-cE
5 6gyr-a2-m1-cB 583 38 0.1224 0.0206 0.3158 1.1 6gyr-a2-m1-cB_6gyr-a2-m1-cD
6 6gyr-a2-m1-cD 584 38 0.1224 0.0205 0.3158 1.1 6gyr-a2-m1-cB_6gyr-a2-m1-cD
7 3rqc-a4-m6-cF 215 19 0.1020 0.0465 0.5263 1.7 3rqc-a4-m6-cF_3rqc-a4-m1-cB
8 3rqc-a4-m6-cG 217 19 0.1020 0.0461 0.5263 1.7 3rqc-a4-m5-cG_3rqc-a4-m6-cG
9 3rqc-a4-m5-cG 217 19 0.1020 0.0461 0.5263 1.7 3rqc-a4-m5-cG_3rqc-a4-m6-cG
10 3rqc-a4-m1-cB 218 19 0.1020 0.0459 0.5263 1.8 3rqc-a4-m6-cF_3rqc-a4-m1-cB
11 6ife-a1-m1-cB 534 34 0.1020 0.0187 0.2941 7.1 6ife-a1-m1-cB_6ife-a1-m1-cA
12 6ife-a1-m1-cA 535 34 0.1020 0.0187 0.2941 7.1 6ife-a1-m1-cB_6ife-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600