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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
ILEESMHARDQLMEQNFALDKARQEAEMAVHARNDFLAVMNHEMRTPMHAIISLSSLLLE
TELSPEQRVMIETILKSSNLVATLISDVLDLSRLED

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4mt8-a1-m1-cB 96 96 1.0000 1.0000 1.0000 3.44e-64 4mt8-a1-m1-cB_4mt8-a1-m1-cA
2 4mt8-a1-m1-cA 100 95 0.9896 0.9500 1.0000 2.57e-63 4mt8-a1-m1-cB_4mt8-a1-m1-cA
3 7z8n-a1-m1-cD 286 81 0.3542 0.1189 0.4198 2.57e-14 7z8n-a1-m1-cA_7z8n-a1-m1-cD, 7z8n-a1-m1-cB_7z8n-a1-m1-cD, 7z8n-a1-m1-cC_7z8n-a1-m1-cD
4 7z8n-a1-m1-cC 286 81 0.3542 0.1189 0.4198 2.57e-14 7z8n-a1-m1-cC_7z8n-a1-m1-cD
5 7z8n-a1-m1-cB 286 81 0.3542 0.1189 0.4198 2.57e-14 7z8n-a1-m1-cB_7z8n-a1-m1-cD
6 7z8n-a1-m1-cA 286 81 0.3542 0.1189 0.4198 2.57e-14 7z8n-a1-m1-cA_7z8n-a1-m1-cD
7 6dk7-a4-m1-cH 225 61 0.2917 0.1244 0.4590 4.28e-13 6dk7-a4-m1-cG_6dk7-a4-m1-cH
8 6dk7-a4-m1-cG 225 61 0.2917 0.1244 0.4590 4.55e-13 6dk7-a4-m1-cG_6dk7-a4-m1-cH
9 6qrj-a1-m2-cA 463 58 0.2188 0.0454 0.3621 8.65e-08 6qrj-a1-m1-cA_6qrj-a1-m2-cA
10 6qrj-a1-m1-cA 463 58 0.2188 0.0454 0.3621 8.65e-08 6qrj-a1-m1-cA_6qrj-a1-m2-cA
11 4q20-a1-m1-cA 231 63 0.2083 0.0866 0.3175 4.47e-04 4q20-a1-m1-cB_4q20-a1-m1-cA
12 4q20-a1-m1-cB 225 63 0.2083 0.0889 0.3175 5.33e-04 4q20-a1-m1-cB_4q20-a1-m1-cA
13 7rzw-a1-m1-cB 864 84 0.2292 0.0255 0.2619 0.024 7rzw-a1-m1-cA_7rzw-a1-m1-cB
14 6nb0-a1-m2-cA 219 34 0.1354 0.0594 0.3824 0.092 6nb0-a1-m1-cA_6nb0-a1-m2-cA
15 6nb0-a1-m1-cA 219 34 0.1354 0.0594 0.3824 0.092 6nb0-a1-m1-cA_6nb0-a1-m2-cA
16 4i5s-a1-m1-cB 395 65 0.1979 0.0481 0.2923 0.19 4i5s-a1-m1-cA_4i5s-a1-m1-cB
17 7ltq-a2-m1-cD 249 66 0.2083 0.0803 0.3030 0.45 7ltq-a2-m1-cB_7ltq-a2-m1-cD
18 7ltq-a2-m1-cB 248 66 0.2083 0.0806 0.3030 0.50 7ltq-a2-m1-cB_7ltq-a2-m1-cD
19 7rzw-a1-m1-cA 859 75 0.1875 0.0210 0.2400 0.50 7rzw-a1-m1-cA_7rzw-a1-m1-cB
20 4i5s-a1-m1-cA 380 62 0.1979 0.0500 0.3065 0.71 4i5s-a1-m1-cA_4i5s-a1-m1-cB
21 6paj-a1-m1-cB 203 65 0.1458 0.0690 0.2154 1.1 6paj-a1-m1-cA_6paj-a1-m1-cB
22 6paj-a1-m1-cA 199 65 0.1458 0.0704 0.2154 1.1 6paj-a1-m1-cA_6paj-a1-m1-cB
23 5ukv-a1-m1-cB 70 26 0.0938 0.1286 0.3462 7.1 5ukv-a1-m1-cA_5ukv-a1-m1-cB
24 5ukv-a1-m1-cA 70 26 0.0938 0.1286 0.3462 7.1 5ukv-a1-m1-cA_5ukv-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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