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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
ILKLYVAGNTPNSVRALKTLKNILEVEFQGVYALKVIDVLKNPQLAEEDKILATPTLAKV
LPLPVRRIIGDLSDREKVLIGLDLLYGELQDSDDF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4kso-a1-m1-cA 95 95 1.0000 1.0000 1.0000 6.19e-63 4kso-a1-m1-cA_4kso-a1-m1-cC, 4kso-a1-m1-cA_4kso-a1-m1-cD
2 4kso-a1-m1-cD 102 95 1.0000 0.9314 1.0000 7.38e-63 4kso-a1-m1-cA_4kso-a1-m1-cD, 4kso-a1-m1-cC_4kso-a1-m1-cD
3 4kso-a1-m1-cC 102 95 1.0000 0.9314 1.0000 7.38e-63 4kso-a1-m1-cA_4kso-a1-m1-cC, 4kso-a1-m1-cC_4kso-a1-m1-cD
4 1wwj-a1-m1-cA 99 91 0.8526 0.8182 0.8901 9.68e-53 1wwj-a1-m1-cC_1wwj-a1-m1-cA, 1wwj-a1-m1-cD_1wwj-a1-m1-cA
5 1wwj-a1-m1-cD 98 90 0.8526 0.8265 0.9000 1.75e-52 1wwj-a1-m1-cC_1wwj-a1-m1-cD, 1wwj-a1-m1-cD_1wwj-a1-m1-cA
6 1wwj-a1-m1-cC 98 90 0.8526 0.8265 0.9000 1.75e-52 1wwj-a1-m1-cC_1wwj-a1-m1-cA, 1wwj-a1-m1-cC_1wwj-a1-m1-cD
7 1r5p-a2-m2-cB 93 89 0.8421 0.8602 0.8989 1.92e-52 1r5p-a2-m2-cA_1r5p-a2-m2-cB
8 1r5p-a2-m2-cA 90 88 0.8316 0.8778 0.8977 7.29e-52 1r5p-a2-m1-cA_1r5p-a2-m2-cA, 1r5p-a2-m2-cA_1r5p-a2-m2-cB
9 1r5p-a2-m1-cA 90 88 0.8316 0.8778 0.8977 7.29e-52 1r5p-a2-m1-cA_1r5p-a2-m2-cA
10 1vgl-a1-m1-cA 96 92 0.8526 0.8438 0.8804 1.39e-51 1vgl-a1-m1-cA_1vgl-a1-m2-cB
11 1vgl-a1-m2-cB 105 92 0.8526 0.7714 0.8804 2.33e-51 1vgl-a1-m1-cA_1vgl-a1-m2-cB
12 5jwq-a1-m3-cB 88 85 0.8211 0.8864 0.9176 1.98e-49 5jwq-a1-m3-cB_5jwq-a1-m3-cD
13 5jwq-a1-m3-cD 89 85 0.8211 0.8764 0.9176 2.02e-49 5jwq-a1-m3-cB_5jwq-a1-m3-cD
14 4kun-a1-m1-cA 89 83 0.4211 0.4494 0.4819 2.90e-18 4kun-a1-m1-cB_4kun-a1-m1-cA
15 4kun-a1-m1-cB 88 83 0.4211 0.4545 0.4819 2.95e-18 4kun-a1-m1-cB_4kun-a1-m1-cA
16 6mfu-a2-m1-cB 215 53 0.1789 0.0791 0.3208 0.83 6mfu-a2-m1-cB_6mfu-a2-m1-cC
17 6mfu-a2-m1-cC 216 53 0.1789 0.0787 0.3208 0.87 6mfu-a2-m1-cB_6mfu-a2-m1-cC
18 5wrw-a3-m1-cF 130 51 0.1789 0.1308 0.3333 2.9 5wrw-a3-m1-cE_5wrw-a3-m1-cF
19 5wrw-a3-m1-cE 130 51 0.1789 0.1308 0.3333 2.9 5wrw-a3-m1-cE_5wrw-a3-m1-cF

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Reference:
Jacob Schwartz et al.

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