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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=38)
ILYDLQQNLSSSHRALEKQIDTLAGKLDALTELLSTAL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6d42-a2-m7-cB 38 38 1.0000 1.0000 1.0000 3.69e-20 6d42-a2-m3-cB_6d42-a2-m7-cB
2 6d42-a2-m3-cB 38 38 1.0000 1.0000 1.0000 3.69e-20 6d42-a2-m3-cB_6d42-a2-m7-cB
3 2pnv-a3-m8-cB 39 30 0.3158 0.3077 0.4000 0.72 2pnv-a3-m7-cB_2pnv-a3-m8-cB
4 2pnv-a3-m7-cB 39 30 0.3158 0.3077 0.4000 0.72 2pnv-a3-m7-cB_2pnv-a3-m8-cB
5 5jjp-a6-m1-cC 392 19 0.2895 0.0281 0.5789 1.3 5jjp-a6-m1-cC_5jjp-a6-m1-cB
6 5jjp-a6-m1-cB 418 19 0.2895 0.0263 0.5789 1.3 5jjp-a6-m1-cC_5jjp-a6-m1-cB
7 6gsc-a1-m1-cB 206 23 0.3158 0.0583 0.5217 2.7 6gsc-a1-m1-cA_6gsc-a1-m1-cB
8 6gsc-a1-m1-cA 205 23 0.3158 0.0585 0.5217 2.8 6gsc-a1-m1-cA_6gsc-a1-m1-cB
9 6is5-a1-m1-cC 301 22 0.2368 0.0299 0.4091 5.2 6is5-a1-m1-cC_6is5-a1-m1-cD
10 6is5-a1-m1-cD 303 22 0.2368 0.0297 0.4091 5.2 6is5-a1-m1-cC_6is5-a1-m1-cD, 6is5-a1-m1-cD_6is5-a1-m1-cB
11 6is5-a1-m1-cB 304 22 0.2368 0.0296 0.4091 5.2 6is5-a1-m1-cD_6is5-a1-m1-cB
12 6a68-a1-m2-cA 159 32 0.3158 0.0755 0.3750 5.9 6a68-a1-m1-cA_6a68-a1-m2-cA
13 6a68-a1-m1-cA 159 32 0.3158 0.0755 0.3750 5.9 6a68-a1-m1-cA_6a68-a1-m2-cA
14 7q4a-a1-m1-cA 334 38 0.3158 0.0359 0.3158 7.8 7q4a-a1-m1-cA_7q4a-a1-m1-cB
15 3odh-a2-m1-cF 194 13 0.2105 0.0412 0.6154 9.1 3odh-a2-m1-cE_3odh-a2-m1-cF
16 3odh-a2-m1-cE 194 13 0.2105 0.0412 0.6154 9.1 3odh-a2-m1-cE_3odh-a2-m1-cF

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Reference:
Jacob Schwartz et al.

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