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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
INDFDEVTVQSSNTTDEIIRDASGAVIEEQITTKKQRNEKIKTFVITTDSDGNESIVEED
VLKTLSD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ua0-a1-m2-cB 67 67 1.0000 1.0000 1.0000 8.84e-41 3ua0-a1-m1-cB_3ua0-a1-m2-cB
2 3ua0-a1-m1-cB 67 67 1.0000 1.0000 1.0000 8.84e-41 3ua0-a1-m1-cB_3ua0-a1-m2-cB
3 3ua0-a1-m2-cA 76 68 0.9104 0.8026 0.8971 3.05e-33 3ua0-a1-m1-cA_3ua0-a1-m2-cA
4 3ua0-a1-m1-cA 76 68 0.9104 0.8026 0.8971 3.05e-33 3ua0-a1-m1-cA_3ua0-a1-m2-cA
5 7uro-a1-m1-cC 1160 40 0.2537 0.0147 0.4250 0.37 7uro-a1-m1-cA_7uro-a1-m1-cC
6 7uro-a1-m1-cA 1160 40 0.2537 0.0147 0.4250 0.37 7uro-a1-m1-cA_7uro-a1-m1-cC
7 5gkj-a1-m1-cB 229 29 0.1642 0.0480 0.3793 6.9 5gkj-a1-m1-cA_5gkj-a1-m1-cB
8 5gke-a1-m1-cB 239 29 0.1642 0.0460 0.3793 7.4 5gke-a1-m1-cA_5gke-a1-m1-cB
9 5gke-a1-m1-cA 239 29 0.1642 0.0460 0.3793 7.4 5gke-a1-m1-cA_5gke-a1-m1-cB
10 2gug-a2-m1-cD 361 20 0.1194 0.0222 0.4000 9.1 2gug-a2-m1-cD_2gug-a2-m1-cB
11 2gug-a2-m1-cB 368 20 0.1194 0.0217 0.4000 9.1 2gug-a2-m1-cD_2gug-a2-m1-cB

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Reference:
Jacob Schwartz et al.

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