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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
INVNVENVSGVQGFLFHTDGKESYGYRAFINGVEIGIKDIETVQGFQQIIPSINISKSDV
EAIRKAMK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4f88-a1-m1-cG 69 68 1.0000 0.9855 1.0000 2.58e-44 4f88-a1-m1-cA_4f88-a1-m1-cG
2 4f88-a1-m1-cA 68 68 1.0000 1.0000 1.0000 2.80e-44 4f88-a1-m1-cA_4f88-a1-m1-cG
3 4f88-a2-m1-cM 65 65 0.9559 1.0000 1.0000 2.35e-42 4f88-a2-m1-cL_4f88-a2-m1-cM
4 7kwy-a1-m2-cA 65 65 0.9412 0.9846 0.9846 8.70e-42 7kwy-a1-m4-cB_7kwy-a1-m2-cA
5 7kwy-a1-m4-cB 63 63 0.9118 0.9841 0.9841 2.46e-40 7kwy-a1-m4-cB_7kwy-a1-m2-cA
6 4f88-a2-m1-cL 55 62 0.8088 1.0000 0.8871 5.61e-29 4f88-a2-m1-cL_4f88-a2-m1-cM
7 4rdz-a1-m1-cB 315 55 0.2794 0.0603 0.3455 0.51 4rdz-a1-m1-cA_4rdz-a1-m1-cB
8 4rdz-a1-m1-cA 314 55 0.2794 0.0605 0.3455 0.53 4rdz-a1-m1-cA_4rdz-a1-m1-cB
9 3g12-a1-m1-cB 113 60 0.2941 0.1770 0.3333 0.73 3g12-a1-m1-cA_3g12-a1-m1-cB
10 3lgn-a1-m1-cB 109 25 0.1176 0.0734 0.3200 5.7 3lgn-a1-m1-cB_3lgn-a1-m1-cA
11 3lgn-a1-m1-cA 110 25 0.1176 0.0727 0.3200 5.8 3lgn-a1-m1-cB_3lgn-a1-m1-cA
12 7qug-a1-m1-cA 397 26 0.1176 0.0202 0.3077 6.0 7qug-a1-m1-cB_7qug-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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