Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
IPCGKFAMYPAWQPDADFQRQAALWGVALREPVTAEELAAFIAYWQAEGKVFHHIQWQQK
LARSVQISRSSN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6aep-a1-m1-cB 72 72 1.0000 1.0000 1.0000 2.19e-49 6aep-a1-m1-cB_6aep-a1-m1-cA
2 6aep-a1-m1-cA 79 72 1.0000 0.9114 1.0000 3.19e-49 6aep-a1-m1-cB_6aep-a1-m1-cA
3 4ou6-a1-m1-cE 71 71 0.8333 0.8451 0.8451 2.35e-41 4ou6-a1-m1-cC_4ou6-a1-m1-cE
4 4ou6-a1-m1-cC 70 70 0.8194 0.8429 0.8429 1.13e-40 4ou6-a1-m1-cC_4ou6-a1-m1-cE
5 1ptm-a1-m1-cB 321 32 0.2083 0.0467 0.4688 4.0 1ptm-a1-m1-cA_1ptm-a1-m1-cB
6 1ptm-a1-m1-cA 321 32 0.2083 0.0467 0.4688 4.0 1ptm-a1-m1-cA_1ptm-a1-m1-cB
7 1woh-a1-m1-cF 303 22 0.1528 0.0363 0.5000 8.3 1woh-a1-m1-cA_1woh-a1-m1-cF, 1woh-a1-m1-cC_1woh-a1-m1-cF, 1woh-a1-m1-cE_1woh-a1-m1-cF
8 1woh-a1-m1-cE 303 22 0.1528 0.0363 0.5000 8.3 1woh-a1-m1-cE_1woh-a1-m1-cF
9 1woh-a1-m1-cC 303 22 0.1528 0.0363 0.5000 8.3 1woh-a1-m1-cC_1woh-a1-m1-cF
10 1woh-a1-m1-cA 303 22 0.1528 0.0363 0.5000 8.3 1woh-a1-m1-cA_1woh-a1-m1-cF
11 3wf8-a2-m2-cA 287 15 0.1111 0.0279 0.5333 8.5 3wf8-a2-m1-cA_3wf8-a2-m2-cA
12 3wf8-a2-m1-cA 287 15 0.1111 0.0279 0.5333 8.5 3wf8-a2-m1-cA_3wf8-a2-m2-cA
13 4rlo-a3-m1-cB 254 15 0.1111 0.0315 0.5333 8.7 4rlo-a3-m1-cB_4rlo-a3-m1-cA
14 2btv-a1-m9-cA 845 20 0.1250 0.0107 0.4500 8.8 2btv-a1-m8-cA_2btv-a1-m9-cA, 2btv-a1-m9-cA_2btv-a1-m9-cB
15 2btv-a1-m8-cA 845 20 0.1250 0.0107 0.4500 8.8 2btv-a1-m8-cA_2btv-a1-m9-cA
16 2btv-a1-m24-cA 845 20 0.1250 0.0107 0.4500 8.8 2btv-a1-m24-cA_2btv-a1-m9-cB
17 2btv-a1-m10-cA 845 20 0.1250 0.0107 0.4500 8.8 2btv-a1-m10-cA_2btv-a1-m9-cB
18 2btv-a1-m9-cB 885 20 0.1250 0.0102 0.4500 9.3 2btv-a1-m10-cA_2btv-a1-m9-cB, 2btv-a1-m24-cA_2btv-a1-m9-cB, 2btv-a1-m54-cB_2btv-a1-m9-cB, 2btv-a1-m9-cA_2btv-a1-m9-cB
19 2btv-a1-m54-cB 885 20 0.1250 0.0102 0.4500 9.3 2btv-a1-m54-cB_2btv-a1-m9-cB
20 4rlo-a3-m1-cA 259 15 0.1111 0.0309 0.5333 9.4 4rlo-a3-m1-cB_4rlo-a3-m1-cA
21 7k5n-a1-m2-cA 237 21 0.1250 0.0380 0.4286 10.0 7k5n-a1-m1-cA_7k5n-a1-m2-cA
22 7k5n-a1-m1-cA 237 21 0.1250 0.0380 0.4286 10.0 7k5n-a1-m1-cA_7k5n-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600