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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
IPCGKFAMYPAWQPDADFQRQAALWGVALREPVTAEELAAFIAYWQAEGKVFHHIQWQQK
LARSVQISRSSNGGMPQRD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6aep-a1-m1-cA 79 79 1.0000 1.0000 1.0000 3.44e-55 6aep-a1-m1-cB_6aep-a1-m1-cA
2 6aep-a1-m1-cB 72 72 0.9114 1.0000 1.0000 3.50e-49 6aep-a1-m1-cB_6aep-a1-m1-cA
3 4ou6-a1-m1-cE 71 71 0.7595 0.8451 0.8451 4.87e-41 4ou6-a1-m1-cC_4ou6-a1-m1-cE
4 4ou6-a1-m1-cC 70 70 0.7468 0.8429 0.8429 2.43e-40 4ou6-a1-m1-cC_4ou6-a1-m1-cE
5 1ptm-a1-m1-cB 321 32 0.1899 0.0467 0.4688 5.2 1ptm-a1-m1-cA_1ptm-a1-m1-cB
6 1ptm-a1-m1-cA 321 32 0.1899 0.0467 0.4688 5.2 1ptm-a1-m1-cA_1ptm-a1-m1-cB
7 3c2u-a3-m1-cD 537 42 0.1139 0.0168 0.2143 8.9 3c2u-a3-m1-cC_3c2u-a3-m1-cD
8 3c2u-a3-m1-cC 537 42 0.1139 0.0168 0.2143 8.9 3c2u-a3-m1-cC_3c2u-a3-m1-cD
9 3c2u-a1-m1-cD 537 42 0.1139 0.0168 0.2143 8.9 3c2u-a1-m1-cB_3c2u-a1-m1-cD
10 3c2u-a1-m1-cB 537 42 0.1139 0.0168 0.2143 8.9 3c2u-a1-m1-cB_3c2u-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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