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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSD
KSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1lyw-a5-m2-cG 95 95 1.0000 1.0000 1.0000 7.84e-68 1lyw-a5-m2-cE_1lyw-a5-m2-cG
2 1lyw-a5-m2-cE 95 95 1.0000 1.0000 1.0000 7.84e-68 1lyw-a5-m2-cE_1lyw-a5-m2-cG
3 1smr-a8-m5-cG 331 91 0.6105 0.1752 0.6374 5.59e-35 1smr-a8-m5-cG_1smr-a8-m1-cE
4 1smr-a8-m1-cE 331 91 0.6105 0.1752 0.6374 5.59e-35 1smr-a8-m5-cG_1smr-a8-m1-cE
5 1smr-a6-m4-cG 331 91 0.6105 0.1752 0.6374 5.59e-35 1smr-a6-m4-cG_1smr-a6-m1-cA
6 1smr-a6-m1-cA 331 91 0.6105 0.1752 0.6374 5.59e-35 1smr-a6-m4-cG_1smr-a6-m1-cA
7 4amt-a1-m2-cA 349 91 0.5684 0.1547 0.5934 4.50e-34 4amt-a1-m1-cA_4amt-a1-m2-cA
8 4amt-a1-m1-cA 349 91 0.5684 0.1547 0.5934 4.50e-34 4amt-a1-m1-cA_4amt-a1-m2-cA
9 3g72-a3-m1-cA 333 89 0.5474 0.1562 0.5843 3.30e-32 3g72-a3-m1-cA_3g72-a3-m1-cB
10 3km4-a1-m1-cB 333 89 0.5474 0.1562 0.5843 3.40e-32 3km4-a1-m1-cB_3km4-a1-m1-cA
11 2g24-a3-m3-cB 329 89 0.5474 0.1581 0.5843 3.45e-32 2g24-a3-m2-cA_2g24-a3-m3-cB
12 2g24-a3-m2-cA 329 89 0.5474 0.1581 0.5843 3.45e-32 2g24-a3-m2-cA_2g24-a3-m3-cB
13 3g72-a3-m1-cB 336 89 0.5474 0.1548 0.5843 3.47e-32 3g72-a3-m1-cA_3g72-a3-m1-cB
14 3km4-a1-m1-cA 337 89 0.5474 0.1543 0.5843 3.57e-32 3km4-a1-m1-cB_3km4-a1-m1-cA
15 3sfc-a5-m3-cB 340 89 0.5474 0.1529 0.5843 3.60e-32 3sfc-a5-m3-cB_3sfc-a5-m2-cB, 3sfc-a5-m3-cB_3sfc-a5-m3-cA
16 3sfc-a5-m3-cA 340 89 0.5474 0.1529 0.5843 3.60e-32 3sfc-a5-m2-cA_3sfc-a5-m3-cA, 3sfc-a5-m3-cB_3sfc-a5-m3-cA
17 3sfc-a5-m2-cB 340 89 0.5474 0.1529 0.5843 3.60e-32 3sfc-a5-m3-cB_3sfc-a5-m2-cB
18 3sfc-a5-m2-cA 340 89 0.5474 0.1529 0.5843 3.60e-32 3sfc-a5-m2-cA_3sfc-a5-m3-cA
19 2jxr-a2-m2-cA 329 88 0.5579 0.1611 0.6023 2.27e-31 2jxr-a2-m2-cA_2jxr-a2-m1-cA
20 2jxr-a2-m1-cA 329 88 0.5579 0.1611 0.6023 2.27e-31 2jxr-a2-m2-cA_2jxr-a2-m1-cA
21 1dpj-a2-m2-cA 329 88 0.5579 0.1611 0.6023 2.27e-31 1dpj-a2-m2-cA_1dpj-a2-m1-cA
22 1dpj-a2-m1-cA 329 88 0.5579 0.1611 0.6023 2.27e-31 1dpj-a2-m2-cA_1dpj-a2-m1-cA
23 1htr-a1-m2-cB 329 85 0.5263 0.1520 0.5882 5.63e-30 1htr-a1-m1-cB_1htr-a1-m2-cB
24 1htr-a1-m1-cB 329 85 0.5263 0.1520 0.5882 5.63e-30 1htr-a1-m1-cB_1htr-a1-m2-cB
25 1tzs-a1-m2-cA 322 90 0.5368 0.1584 0.5667 6.59e-29 1tzs-a1-m1-cA_1tzs-a1-m2-cA
26 1tzs-a1-m1-cA 322 90 0.5368 0.1584 0.5667 6.59e-29 1tzs-a1-m1-cA_1tzs-a1-m2-cA
27 1psa-a1-m1-cB 326 90 0.5263 0.1534 0.5556 3.34e-28 1psa-a1-m1-cA_1psa-a1-m1-cB
28 1psa-a1-m1-cA 326 90 0.5263 0.1534 0.5556 3.34e-28 1psa-a1-m1-cA_1psa-a1-m1-cB
29 4aa8-a1-m2-cA 323 88 0.5158 0.1517 0.5568 1.59e-27 4aa8-a1-m1-cA_4aa8-a1-m2-cA
30 4aa8-a1-m1-cA 323 88 0.5158 0.1517 0.5568 1.59e-27 4aa8-a1-m1-cA_4aa8-a1-m2-cA
31 1b5f-a1-m1-cC 238 89 0.5368 0.2143 0.5730 3.11e-27 1b5f-a1-m1-cC_1b5f-a1-m1-cA
32 1b5f-a1-m1-cA 239 89 0.5368 0.2134 0.5730 3.21e-27 1b5f-a1-m1-cC_1b5f-a1-m1-cA
33 2psg-a1-m2-cA 369 90 0.5263 0.1355 0.5556 1.80e-26 2psg-a1-m2-cA_2psg-a1-m1-cA
34 2psg-a1-m1-cA 369 90 0.5263 0.1355 0.5556 1.80e-26 2psg-a1-m2-cA_2psg-a1-m1-cA
35 1ls5-a4-m1-cB 328 88 0.4211 0.1220 0.4545 8.38e-21 1ls5-a4-m1-cA_1ls5-a4-m1-cB
36 1ls5-a4-m1-cA 328 88 0.4211 0.1220 0.4545 8.38e-21 1ls5-a4-m1-cA_1ls5-a4-m1-cB
37 1ls5-a3-m2-cB 328 88 0.4211 0.1220 0.4545 8.38e-21 1ls5-a3-m1-cA_1ls5-a3-m2-cB, 1ls5-a3-m1-cB_1ls5-a3-m2-cB
38 1ls5-a3-m1-cB 328 88 0.4211 0.1220 0.4545 8.38e-21 1ls5-a3-m1-cB_1ls5-a3-m2-cB
39 1ls5-a3-m1-cA 328 88 0.4211 0.1220 0.4545 8.38e-21 1ls5-a3-m1-cA_1ls5-a3-m2-cB
40 5jod-a2-m3-cB 375 88 0.4211 0.1067 0.4545 1.14e-20 5jod-a2-m3-cB_5jod-a2-m1-cA
41 5jod-a2-m1-cA 375 88 0.4211 0.1067 0.4545 1.14e-20 5jod-a2-m3-cB_5jod-a2-m1-cA
42 3qs1-a1-m1-cD 326 88 0.4211 0.1227 0.4545 1.51e-20 3qs1-a1-m1-cD_3qs1-a1-m1-cA, 3qs1-a1-m1-cD_3qs1-a1-m1-cC
43 3qs1-a1-m1-cC 326 88 0.4211 0.1227 0.4545 1.51e-20 3qs1-a1-m1-cD_3qs1-a1-m1-cC
44 3qrv-a1-m1-cB 329 88 0.4211 0.1216 0.4545 1.58e-20 3qrv-a1-m1-cB_3qrv-a1-m1-cA
45 3qs1-a1-m1-cA 327 88 0.4211 0.1223 0.4545 1.59e-20 3qs1-a1-m1-cD_3qs1-a1-m1-cA
46 1xdh-a1-m1-cB 329 88 0.4000 0.1155 0.4318 1.17e-19 1xdh-a1-m1-cA_1xdh-a1-m1-cB
47 1xdh-a1-m1-cA 329 88 0.4000 0.1155 0.4318 1.17e-19 1xdh-a1-m1-cA_1xdh-a1-m1-cB
48 4cku-a1-m2-cF 329 88 0.4000 0.1155 0.4318 1.21e-19 4cku-a1-m1-cA_4cku-a1-m2-cF, 4cku-a1-m2-cA_4cku-a1-m2-cF
49 1lee-a3-m4-cA 331 88 0.4000 0.1148 0.4318 1.23e-19 1lee-a3-m3-cA_1lee-a3-m4-cA
50 1lee-a3-m3-cA 331 88 0.4000 0.1148 0.4318 1.23e-19 1lee-a3-m3-cA_1lee-a3-m4-cA
51 4cku-a2-m1-cE 322 88 0.4000 0.1180 0.4318 1.25e-19 4cku-a2-m1-cE_4cku-a2-m1-cB
52 4cku-a1-m2-cA 323 88 0.4000 0.1176 0.4318 1.32e-19 4cku-a1-m2-cA_4cku-a1-m2-cF
53 4cku-a1-m1-cA 323 88 0.4000 0.1176 0.4318 1.32e-19 4cku-a1-m1-cA_4cku-a1-m2-cF
54 3f9q-a1-m2-cA 325 88 0.4000 0.1169 0.4318 1.33e-19 3f9q-a1-m1-cA_3f9q-a1-m2-cA
55 3f9q-a1-m1-cA 325 88 0.4000 0.1169 0.4318 1.33e-19 3f9q-a1-m1-cA_3f9q-a1-m2-cA
56 4cku-a2-m1-cB 327 88 0.4000 0.1162 0.4318 1.38e-19 4cku-a2-m1-cE_4cku-a2-m1-cB
57 1qs8-a4-m3-cB 328 88 0.4105 0.1189 0.4432 1.05e-18 1qs8-a4-m3-cA_1qs8-a4-m3-cB, 1qs8-a4-m3-cB_1qs8-a4-m1-cB
58 1qs8-a4-m1-cB 328 88 0.4105 0.1189 0.4432 1.05e-18 1qs8-a4-m3-cB_1qs8-a4-m1-cB
59 1qs8-a3-m2-cB 328 88 0.4105 0.1189 0.4432 1.05e-18 1qs8-a3-m1-cA_1qs8-a3-m2-cB
60 1qs8-a4-m3-cA 327 88 0.4105 0.1193 0.4432 1.06e-18 1qs8-a4-m1-cA_1qs8-a4-m3-cA, 1qs8-a4-m3-cA_1qs8-a4-m3-cB
61 1qs8-a4-m1-cA 327 88 0.4105 0.1193 0.4432 1.06e-18 1qs8-a4-m1-cA_1qs8-a4-m3-cA
62 1qs8-a3-m1-cA 327 88 0.4105 0.1193 0.4432 1.06e-18 1qs8-a3-m1-cA_1qs8-a3-m2-cB
63 3qrv-a1-m1-cA 323 88 0.4000 0.1176 0.4318 6.02e-17 3qrv-a1-m1-cB_3qrv-a1-m1-cA
64 1pfz-a6-m1-cA 370 88 0.3684 0.0946 0.3977 1.87e-15 1pfz-a6-m1-cC_1pfz-a6-m1-cA
65 1pfz-a6-m1-cC 356 86 0.3579 0.0955 0.3953 7.18e-15 1pfz-a6-m1-cC_1pfz-a6-m1-cA
66 7ry7-a1-m2-cA 433 74 0.2842 0.0624 0.3649 6.46e-11 7ry7-a1-m1-cA_7ry7-a1-m2-cA
67 7ry7-a1-m1-cA 433 74 0.2842 0.0624 0.3649 6.46e-11 7ry7-a1-m1-cA_7ry7-a1-m2-cA
68 2ewy-a6-m1-cD 374 81 0.3053 0.0775 0.3580 2.65e-10 2ewy-a6-m1-cC_2ewy-a6-m1-cD
69 2ewy-a6-m1-cC 374 81 0.3053 0.0775 0.3580 2.65e-10 2ewy-a6-m1-cC_2ewy-a6-m1-cD
70 2qzx-a3-m1-cB 342 90 0.3368 0.0936 0.3556 5.95e-07 2qzx-a3-m1-cB_2qzx-a3-m1-cA
71 2qzx-a3-m1-cA 342 90 0.3368 0.0936 0.3556 5.95e-07 2qzx-a3-m1-cB_2qzx-a3-m1-cA
72 1eag-a1-m2-cA 339 98 0.3789 0.1062 0.3673 1.58e-06 1eag-a1-m1-cA_1eag-a1-m2-cA
73 1eag-a1-m1-cA 339 98 0.3789 0.1062 0.3673 1.58e-06 1eag-a1-m1-cA_1eag-a1-m2-cA
74 2h6t-a2-m2-cA 340 28 0.1684 0.0471 0.5714 6.13e-04 2h6t-a2-m1-cA_2h6t-a2-m2-cA
75 2h6t-a2-m1-cA 340 28 0.1684 0.0471 0.5714 6.13e-04 2h6t-a2-m1-cA_2h6t-a2-m2-cA
76 4rld-a6-m1-cD 330 85 0.2632 0.0758 0.2941 0.067 4rld-a6-m1-cD_4rld-a6-m1-cC
77 4rld-a6-m1-cC 330 85 0.2632 0.0758 0.2941 0.067 4rld-a6-m1-cD_4rld-a6-m1-cC
78 2wec-a1-m2-cA 323 84 0.2842 0.0836 0.3214 1.1 2wec-a1-m1-cA_2wec-a1-m2-cA
79 2wec-a1-m1-cA 323 84 0.2842 0.0836 0.3214 1.1 2wec-a1-m1-cA_2wec-a1-m2-cA
80 4fql-a2-m2-cH 225 56 0.1579 0.0667 0.2679 6.8 4fql-a2-m2-cH_4fql-a2-m1-cH
81 4fql-a2-m1-cH 225 56 0.1579 0.0667 0.2679 6.8 4fql-a2-m2-cH_4fql-a2-m1-cH

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Reference:
Jacob Schwartz et al.

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