Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=67)
IPLARTVRCNCIHIDDGPVRMRAIGKLEIIPASLSCPRVEIIATMKKNDEQRCLNPESKT
IKNLMKA

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 2r3z-a1-m1-cA 68 67 1.0000 0.9853 1.0000 3.89e-44 2r3z-a1-m1-cB_2r3z-a1-m1-cA, 2r3z-a1-m1-cD_2r3z-a1-m1-cA
2 2r3z-a1-m1-cB 67 67 1.0000 1.0000 1.0000 4.09e-44 2r3z-a1-m1-cB_2r3z-a1-m1-cA
3 2r3z-a1-m1-cD 64 64 0.9552 1.0000 1.0000 5.06e-42 2r3z-a1-m1-cD_2r3z-a1-m1-cA
4 1o7y-a1-m1-cA 67 65 0.7015 0.7015 0.7231 1.13e-27 1o7y-a1-m1-cC_1o7y-a1-m1-cA
5 1o7y-a1-m1-cC 63 61 0.6567 0.6984 0.7213 3.27e-25 1o7y-a1-m1-cB_1o7y-a1-m1-cC, 1o7y-a1-m1-cC_1o7y-a1-m1-cA, 1o7y-a1-m1-cD_1o7y-a1-m1-cC
6 1o7y-a1-m1-cD 62 60 0.6418 0.6935 0.7167 1.22e-24 1o7y-a1-m1-cD_1o7y-a1-m1-cC
7 1o7y-a1-m1-cB 62 59 0.6269 0.6774 0.7119 7.35e-24 1o7y-a1-m1-cB_1o7y-a1-m1-cC
8 1pfn-a1-m1-cD 68 63 0.3433 0.3382 0.3651 8.05e-06 1pfn-a1-m1-cB_1pfn-a1-m1-cD
9 1pfn-a1-m1-cC 68 63 0.3433 0.3382 0.3651 8.05e-06 1pfn-a1-m1-cB_1pfn-a1-m1-cC
10 1pfn-a1-m1-cB 68 63 0.3433 0.3382 0.3651 8.05e-06 1pfn-a1-m1-cB_1pfn-a1-m1-cC, 1pfn-a1-m1-cB_1pfn-a1-m1-cD
11 2mgs-a1-m1-cB 71 62 0.2836 0.2676 0.3065 1.49e-05 2mgs-a1-m1-cA_2mgs-a1-m1-cB
12 2mgs-a1-m1-cA 71 62 0.2836 0.2676 0.3065 1.49e-05 2mgs-a1-m1-cA_2mgs-a1-m1-cB
13 1tvx-a1-m1-cD 71 64 0.3284 0.3099 0.3438 8.01e-05 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
14 1tvx-a1-m1-cB 71 64 0.3284 0.3099 0.3438 8.01e-05 1tvx-a1-m1-cB_1tvx-a1-m1-cD
15 1tvx-a1-m1-cC 64 60 0.3134 0.3281 0.3500 1.20e-04 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
16 1tvx-a1-m1-cA 64 60 0.3134 0.3281 0.3500 1.20e-04 1tvx-a1-m1-cA_1tvx-a1-m1-cC
17 1plf-a1-m1-cC 63 65 0.3433 0.3651 0.3538 2.54e-04 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cC_1plf-a1-m1-cD
18 1plf-a1-m1-cA 63 65 0.3433 0.3651 0.3538 2.54e-04 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cA_1plf-a1-m1-cD
19 1plf-a1-m1-cD 65 65 0.3433 0.3538 0.3538 3.08e-04 1plf-a1-m1-cA_1plf-a1-m1-cD, 1plf-a1-m1-cB_1plf-a1-m1-cD, 1plf-a1-m1-cC_1plf-a1-m1-cD
20 1plf-a1-m1-cB 65 65 0.3433 0.3538 0.3538 3.08e-04 1plf-a1-m1-cB_1plf-a1-m1-cD
21 1rod-a1-m1-cB 72 63 0.2687 0.2500 0.2857 4.88e-04 1rod-a1-m1-cA_1rod-a1-m1-cB
22 1rod-a1-m1-cA 72 63 0.2687 0.2500 0.2857 4.88e-04 1rod-a1-m1-cA_1rod-a1-m1-cB
23 4r9w-a1-m2-cA 62 60 0.3134 0.3387 0.3500 4.99e-04 4r9w-a1-m2-cA_4r9w-a1-m2-cB
24 4r9w-a1-m1-cA 62 60 0.3134 0.3387 0.3500 4.99e-04 4r9w-a1-m1-cA_4r9w-a1-m2-cB
25 4r9w-a1-m2-cB 64 60 0.3134 0.3281 0.3500 5.54e-04 4r9w-a1-m1-cA_4r9w-a1-m2-cB, 4r9w-a1-m2-cA_4r9w-a1-m2-cB
26 4r9y-a1-m1-cD 65 60 0.3134 0.3231 0.3500 5.90e-04 4r9y-a1-m1-cB_4r9y-a1-m1-cD
27 4r9y-a1-m1-cB 65 60 0.3134 0.3231 0.3500 5.90e-04 4r9y-a1-m1-cB_4r9y-a1-m1-cD
28 1f9q-a1-m1-cC 62 59 0.3134 0.3387 0.3559 7.22e-04 1f9q-a1-m1-cB_1f9q-a1-m1-cC
29 1f9q-a1-m1-cB 62 59 0.3134 0.3387 0.3559 7.22e-04 1f9q-a1-m1-cB_1f9q-a1-m1-cC
30 4hsv-a1-m1-cD 65 60 0.3134 0.3231 0.3500 7.65e-04 4hsv-a1-m1-cA_4hsv-a1-m1-cD, 4hsv-a1-m1-cC_4hsv-a1-m1-cD
31 4hsv-a1-m1-cA 65 60 0.3134 0.3231 0.3500 7.65e-04 4hsv-a1-m1-cA_4hsv-a1-m1-cD
32 4hsv-a1-m1-cC 59 59 0.3134 0.3559 0.3559 7.83e-04 4hsv-a1-m1-cC_4hsv-a1-m1-cD
33 1msh-a1-m1-cB 72 64 0.2836 0.2639 0.2969 0.001 1msh-a1-m1-cA_1msh-a1-m1-cB
34 1msh-a1-m1-cA 72 64 0.2836 0.2639 0.2969 0.001 1msh-a1-m1-cA_1msh-a1-m1-cB
35 6wzj-a1-m1-cE 63 59 0.2687 0.2857 0.3051 0.001 6wzj-a1-m1-cF_6wzj-a1-m1-cE
36 3n52-a3-m1-cD 70 64 0.2687 0.2571 0.2812 0.001 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
37 3n52-a3-m1-cB 71 64 0.2687 0.2535 0.2812 0.001 3n52-a3-m1-cD_3n52-a3-m1-cB
38 1mi2-a1-m1-cB 73 64 0.2687 0.2466 0.2812 0.002 1mi2-a1-m1-cA_1mi2-a1-m1-cB
39 1mi2-a1-m1-cA 73 64 0.2687 0.2466 0.2812 0.002 1mi2-a1-m1-cA_1mi2-a1-m1-cB
40 3n52-a3-m1-cC 67 60 0.2537 0.2537 0.2833 0.005 3n52-a3-m1-cC_3n52-a3-m1-cD
41 1qe6-a3-m2-cB 71 63 0.2537 0.2394 0.2698 0.007 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
42 1qe6-a3-m1-cD 72 63 0.2537 0.2361 0.2698 0.007 1qe6-a3-m2-cB_1qe6-a3-m1-cD
43 6wzj-a1-m1-cF 59 59 0.2537 0.2881 0.2881 0.011 6wzj-a1-m1-cF_6wzj-a1-m1-cE
44 6wzk-a1-m1-cF 64 60 0.2537 0.2656 0.2833 0.012 6wzk-a1-m1-cE_6wzk-a1-m1-cF
45 6wzk-a1-m1-cE 64 60 0.2537 0.2656 0.2833 0.012 6wzk-a1-m1-cE_6wzk-a1-m1-cF
46 1qe6-a3-m2-cA 68 59 0.2388 0.2353 0.2712 0.029 1qe6-a3-m2-cA_1qe6-a3-m2-cB
47 4uai-a1-m1-cB 67 65 0.2537 0.2537 0.2615 0.20 4uai-a1-m1-cB_4uai-a1-m1-cA
48 4uai-a1-m1-cA 68 65 0.2537 0.2500 0.2615 0.21 4uai-a1-m1-cB_4uai-a1-m1-cA
49 3hp3-a3-m1-cF 65 28 0.1343 0.1385 0.3214 1.4 3hp3-a3-m1-cD_3hp3-a3-m1-cF
50 3hp3-a3-m1-cD 64 28 0.1343 0.1406 0.3214 1.5 3hp3-a3-m1-cD_3hp3-a3-m1-cF
51 3ns2-a2-m2-cC 181 48 0.2090 0.0773 0.2917 7.4 3ns2-a2-m1-cC_3ns2-a2-m2-cC
52 3ns2-a2-m1-cC 181 48 0.2090 0.0773 0.2917 7.4 3ns2-a2-m1-cC_3ns2-a2-m2-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600