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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=47)
IPTMRSEIQQLKTSVAVMEANLGMMKILDPGCANVSSLSDLRAVAKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7yov-a1-m1-cD 76 47 1.0000 0.6184 1.0000 1.08e-28 7yov-a1-m1-cD_7yov-a1-m1-cE
2 7you-a1-m1-cC 47 47 1.0000 1.0000 1.0000 1.21e-28 7you-a1-m1-cB_7you-a1-m1-cC
3 7you-a1-m1-cD 54 47 1.0000 0.8704 1.0000 1.50e-28 7you-a1-m1-cB_7you-a1-m1-cD
4 7yov-a1-m1-cE 158 47 1.0000 0.2975 1.0000 1.41e-27 7yov-a1-m1-cD_7yov-a1-m1-cE
5 7yot-a1-m1-cD 51 44 0.9362 0.8627 1.0000 5.29e-26 7yot-a1-m1-cC_7yot-a1-m1-cD
6 7yot-a1-m1-cC 42 42 0.8936 1.0000 1.0000 2.27e-24 7yot-a1-m1-cC_7yot-a1-m1-cD
7 7you-a1-m1-cB 41 41 0.8723 1.0000 1.0000 3.03e-24 7you-a1-m1-cB_7you-a1-m1-cC, 7you-a1-m1-cB_7you-a1-m1-cD
8 1sh5-a1-m1-cB 232 26 0.1702 0.0345 0.3077 4.4 1sh5-a1-m1-cA_1sh5-a1-m1-cB
9 1sh5-a1-m1-cA 232 26 0.1702 0.0345 0.3077 4.4 1sh5-a1-m1-cA_1sh5-a1-m1-cB
10 1qag-a3-m1-cB 221 27 0.1915 0.0407 0.3333 9.5 1qag-a3-m1-cA_1qag-a3-m1-cB
11 1qag-a3-m1-cA 221 27 0.1915 0.0407 0.3333 9.5 1qag-a3-m1-cA_1qag-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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