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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=54)
IPTMRSEIQQLKTSVAVMEANLGMMKILDPGCANVSSLSDLRAVAKSHPVLIAG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7you-a1-m1-cD 54 54 1.0000 1.0000 1.0000 3.46e-34 7you-a1-m1-cB_7you-a1-m1-cD
2 7yov-a1-m1-cD 76 53 0.9815 0.6974 1.0000 1.63e-33 7yov-a1-m1-cD_7yov-a1-m1-cE
3 7yov-a1-m1-cE 158 54 1.0000 0.3418 1.0000 4.30e-33 7yov-a1-m1-cD_7yov-a1-m1-cE
4 7yot-a1-m1-cD 51 51 0.9444 1.0000 1.0000 9.87e-32 7yot-a1-m1-cC_7yot-a1-m1-cD
5 7you-a1-m1-cC 47 47 0.8704 1.0000 1.0000 1.73e-28 7you-a1-m1-cB_7you-a1-m1-cC
6 7yot-a1-m1-cC 42 42 0.7778 1.0000 1.0000 2.84e-24 7yot-a1-m1-cC_7yot-a1-m1-cD
7 7you-a1-m1-cB 41 41 0.7593 1.0000 1.0000 3.91e-24 7you-a1-m1-cB_7you-a1-m1-cC, 7you-a1-m1-cB_7you-a1-m1-cD
8 5epv-a3-m1-cA 216 46 0.2593 0.0648 0.3043 3.4 5epv-a3-m1-cB_5epv-a3-m1-cA
9 1sh5-a1-m1-cB 232 26 0.1481 0.0345 0.3077 5.9 1sh5-a1-m1-cA_1sh5-a1-m1-cB
10 1sh5-a1-m1-cA 232 26 0.1481 0.0345 0.3077 5.9 1sh5-a1-m1-cA_1sh5-a1-m1-cB
11 6ph4-a1-m1-cB 460 50 0.2778 0.0326 0.3000 9.3 6ph4-a1-m1-cA_6ph4-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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