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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
IQINQVRPKLPLLKILHAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLL
GELLGRQSFSVKDPSPLYDMLRKNLVTLAT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3fdo-a4-m2-cA 90 90 1.0000 1.0000 1.0000 5.43e-63 3fdo-a4-m1-cA_3fdo-a4-m2-cA
2 3fdo-a4-m1-cA 90 90 1.0000 1.0000 1.0000 5.43e-63 3fdo-a4-m1-cA_3fdo-a4-m2-cA
3 2vyr-a1-m1-cD 85 85 0.9444 1.0000 1.0000 3.44e-59 2vyr-a1-m1-cA_2vyr-a1-m1-cD
4 2vyr-a1-m1-cA 85 85 0.9444 1.0000 1.0000 3.44e-59 2vyr-a1-m1-cA_2vyr-a1-m1-cD
5 3u15-a2-m1-cC 82 82 0.9111 1.0000 1.0000 9.17e-57 3u15-a2-m1-cD_3u15-a2-m1-cC
6 3u15-a2-m1-cD 81 81 0.9000 1.0000 1.0000 4.38e-56 3u15-a2-m1-cD_3u15-a2-m1-cC
7 4nzd-a4-m4-cC 210 51 0.1889 0.0810 0.3333 0.49 4nzd-a4-m2-cA_4nzd-a4-m4-cC, 4nzd-a4-m3-cA_4nzd-a4-m4-cC
8 4nzd-a4-m3-cA 210 51 0.1889 0.0810 0.3333 0.50 4nzd-a4-m3-cA_4nzd-a4-m4-cC
9 4nzd-a4-m2-cA 210 51 0.1889 0.0810 0.3333 0.50 4nzd-a4-m2-cA_4nzd-a4-m4-cC

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Reference:
Jacob Schwartz et al.

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