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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=29)
ISQESKLINTLTDENEKLREELQQYYALS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5hyt-a2-m1-cG 29 29 1.0000 1.0000 1.0000 5.71e-14 5hyt-a2-m1-cE_5hyt-a2-m1-cG
2 5hyt-a2-m1-cE 28 28 0.9655 1.0000 1.0000 2.60e-13 5hyt-a2-m1-cE_5hyt-a2-m1-cG
3 5djn-a1-m1-cA 77 24 0.4138 0.1558 0.5000 0.88 5djn-a1-m1-cA_5djn-a1-m1-cC
4 5djn-a1-m1-cC 81 24 0.4138 0.1481 0.5000 0.99 5djn-a1-m1-cA_5djn-a1-m1-cC
5 6opm-a1-m1-cD 333 24 0.3448 0.0300 0.4167 2.2 6opm-a1-m1-cA_6opm-a1-m1-cD, 6opm-a1-m1-cD_6opm-a1-m1-cC
6 6opm-a1-m1-cA 333 24 0.3448 0.0300 0.4167 2.2 6opm-a1-m1-cA_6opm-a1-m1-cD
7 6opm-a1-m1-cC 351 24 0.3448 0.0285 0.4167 2.4 6opm-a1-m1-cD_6opm-a1-m1-cC
8 7bgf-a1-m1-cA 112 16 0.3793 0.0982 0.6875 4.2 7bgf-a1-m1-cB_7bgf-a1-m1-cA
9 1r6w-a1-m2-cA 321 19 0.3448 0.0312 0.5263 9.3 1r6w-a1-m1-cA_1r6w-a1-m2-cA
10 1r6w-a1-m1-cA 321 19 0.3448 0.0312 0.5263 9.3 1r6w-a1-m1-cA_1r6w-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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