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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
ITIDEDLAKLAKLREGMKVEIVDVNNGERFSTYVILGKKRGEICVNGAAARKVAIGDVVI
ILAYASMNEDEINAHKPSIVLVDEKNEILEKGLEHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1uhe-a2-m8-cA 97 97 1.0000 1.0000 1.0000 2.18e-65 1uhe-a2-m6-cA_1uhe-a2-m8-cA
2 1uhe-a2-m6-cA 97 97 1.0000 1.0000 1.0000 2.18e-65 1uhe-a2-m6-cA_1uhe-a2-m8-cA
3 3plx-a1-m4-cB 100 86 0.4433 0.4300 0.5000 2.04e-25 3plx-a1-m2-cB_3plx-a1-m4-cB
4 3plx-a1-m2-cB 100 86 0.4433 0.4300 0.5000 2.04e-25 3plx-a1-m2-cB_3plx-a1-m4-cB
5 6p02-a1-m1-cH 90 88 0.4330 0.4667 0.4773 3.68e-21 6p02-a1-m1-cB_6p02-a1-m1-cH
6 6p02-a1-m1-cB 90 88 0.4330 0.4667 0.4773 3.68e-21 6p02-a1-m1-cB_6p02-a1-m1-cH
7 1vc3-a2-m4-cB 95 91 0.4227 0.4316 0.4505 6.16e-21 1vc3-a2-m3-cB_1vc3-a2-m4-cB
8 1vc3-a2-m3-cB 95 91 0.4227 0.4316 0.4505 6.16e-21 1vc3-a2-m3-cB_1vc3-a2-m4-cB
9 1aw8-a1-m2-cE 90 88 0.3505 0.3778 0.3864 2.09e-15 1aw8-a1-m2-cB_1aw8-a1-m2-cE
10 1aw8-a1-m2-cB 90 88 0.3505 0.3778 0.3864 2.09e-15 1aw8-a1-m2-cB_1aw8-a1-m2-cE
11 3oug-a3-m1-cI 105 81 0.3608 0.3333 0.4321 6.77e-13 3oug-a3-m1-cG_3oug-a3-m1-cI
12 3oug-a3-m1-cH 105 81 0.3608 0.3333 0.4321 6.77e-13 3oug-a3-m1-cB_3oug-a3-m1-cH
13 3oug-a3-m1-cG 105 81 0.3608 0.3333 0.4321 6.77e-13 3oug-a3-m1-cG_3oug-a3-m1-cI
14 3oug-a3-m1-cB 105 81 0.3608 0.3333 0.4321 6.77e-13 3oug-a3-m1-cB_3oug-a3-m1-cH

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Reference:
Jacob Schwartz et al.

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