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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
IVCHTTATIPSSAVTCPPGENLCYRKMWCDAFCSSRGKVVELGCAATCPSKKPYEEVTCC
STDKCNHPPKRQPG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2abx-a1-m1-cB 74 74 1.0000 1.0000 1.0000 1.93e-50 2abx-a1-m1-cA_2abx-a1-m1-cB
2 2abx-a1-m1-cA 74 74 1.0000 1.0000 1.0000 1.93e-50 2abx-a1-m1-cA_2abx-a1-m1-cB
3 4lft-a1-m1-cA 64 59 0.5270 0.6094 0.6610 3.18e-23 4lft-a1-m1-cA_4lft-a1-m1-cB
4 4lft-a1-m1-cB 72 60 0.5270 0.5417 0.6500 3.18e-23 4lft-a1-m1-cA_4lft-a1-m1-cB
5 6zfm-a1-m1-cD 71 72 0.5405 0.5634 0.5556 3.88e-18 6zfm-a1-m1-cA_6zfm-a1-m1-cD
6 6zfm-a1-m1-cA 71 72 0.5405 0.5634 0.5556 3.88e-18 6zfm-a1-m1-cA_6zfm-a1-m1-cD, 6zfm-a1-m1-cE_6zfm-a1-m1-cA
7 2ctx-a1-m2-cA 71 72 0.5405 0.5634 0.5556 3.88e-18 2ctx-a1-m1-cA_2ctx-a1-m2-cA
8 2ctx-a1-m1-cA 71 72 0.5405 0.5634 0.5556 3.88e-18 2ctx-a1-m1-cA_2ctx-a1-m2-cA
9 6zfm-a1-m1-cE 65 60 0.4730 0.5385 0.5833 2.27e-17 6zfm-a1-m1-cE_6zfm-a1-m1-cA
10 4aea-a2-m2-cB 67 69 0.5270 0.5821 0.5652 2.78e-17 4aea-a2-m1-cB_4aea-a2-m2-cB
11 4aea-a2-m1-cB 67 69 0.5270 0.5821 0.5652 2.78e-17 4aea-a2-m1-cB_4aea-a2-m2-cB
12 1qkd-a1-m1-cB 62 61 0.3243 0.3871 0.3934 3.83e-09 1qkd-a1-m1-cA_1qkd-a1-m1-cB
13 1qkd-a1-m1-cA 62 61 0.3243 0.3871 0.3934 3.83e-09 1qkd-a1-m1-cA_1qkd-a1-m1-cB
14 1cdt-a1-m1-cB 60 58 0.3243 0.4000 0.4138 3.70e-08 1cdt-a1-m1-cA_1cdt-a1-m1-cB
15 1cdt-a1-m1-cA 60 58 0.3243 0.4000 0.4138 3.70e-08 1cdt-a1-m1-cA_1cdt-a1-m1-cB
16 1v6p-a1-m1-cB 62 68 0.3649 0.4355 0.3971 1.42e-07 1v6p-a1-m1-cA_1v6p-a1-m1-cB
17 1v6p-a1-m1-cA 62 68 0.3649 0.4355 0.3971 1.42e-07 1v6p-a1-m1-cA_1v6p-a1-m1-cB
18 4do8-a3-m2-cB 66 53 0.3108 0.3485 0.4340 4.35e-07 4do8-a3-m1-cA_4do8-a3-m2-cB, 4do8-a3-m1-cB_4do8-a3-m2-cB, 4do8-a3-m2-cA_4do8-a3-m2-cB
19 4do8-a3-m2-cA 66 53 0.3108 0.3485 0.4340 4.35e-07 4do8-a3-m2-cA_4do8-a3-m2-cB
20 4do8-a3-m1-cB 66 53 0.3108 0.3485 0.4340 4.35e-07 4do8-a3-m1-cB_4do8-a3-m2-cB
21 4do8-a3-m1-cA 66 53 0.3108 0.3485 0.4340 4.35e-07 4do8-a3-m1-cA_4do8-a3-m2-cB
22 1ff4-a2-m3-cA 65 67 0.3243 0.3692 0.3582 6.44e-07 1ff4-a2-m1-cA_1ff4-a2-m3-cA
23 1ff4-a2-m1-cA 65 67 0.3243 0.3692 0.3582 6.44e-07 1ff4-a2-m1-cA_1ff4-a2-m3-cA
24 1ff4-a1-m2-cA 65 67 0.3243 0.3692 0.3582 6.44e-07 1ff4-a1-m1-cA_1ff4-a1-m2-cA
25 1ff4-a1-m1-cA 65 67 0.3243 0.3692 0.3582 6.44e-07 1ff4-a1-m1-cA_1ff4-a1-m2-cA
26 3neq-a3-m2-cA 66 53 0.3108 0.3485 0.4340 1.89e-06 3neq-a3-m1-cB_3neq-a3-m2-cA
27 3neq-a3-m1-cB 66 53 0.3108 0.3485 0.4340 1.89e-06 3neq-a3-m1-cB_3neq-a3-m2-cA
28 1kxi-a1-m1-cB 62 69 0.3649 0.4355 0.3913 1.91e-06 1kxi-a1-m1-cA_1kxi-a1-m1-cB
29 1kxi-a1-m1-cA 62 69 0.3649 0.4355 0.3913 1.91e-06 1kxi-a1-m1-cA_1kxi-a1-m1-cB
30 3hh7-a1-m1-cB 65 62 0.3108 0.3538 0.3710 3.47e-06 3hh7-a1-m1-cA_3hh7-a1-m1-cB
31 3hh7-a1-m1-cA 65 62 0.3108 0.3538 0.3710 3.47e-06 3hh7-a1-m1-cA_3hh7-a1-m1-cB
32 4om4-a1-m1-cE 60 59 0.3108 0.3833 0.3898 3.80e-06 4om4-a1-m1-cA_4om4-a1-m1-cE, 4om4-a1-m1-cC_4om4-a1-m1-cE, 4om4-a1-m1-cD_4om4-a1-m1-cE
33 4om4-a1-m1-cD 60 59 0.3108 0.3833 0.3898 3.80e-06 4om4-a1-m1-cD_4om4-a1-m1-cE
34 4om4-a1-m1-cC 60 59 0.3108 0.3833 0.3898 3.80e-06 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cC_4om4-a1-m1-cE
35 4om4-a1-m1-cB 60 59 0.3108 0.3833 0.3898 3.80e-06 4om4-a1-m1-cA_4om4-a1-m1-cB
36 4om4-a1-m1-cA 60 59 0.3108 0.3833 0.3898 3.80e-06 4om4-a1-m1-cA_4om4-a1-m1-cB, 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cA_4om4-a1-m1-cE
37 4om5-a1-m1-cC 60 59 0.3108 0.3833 0.3898 4.10e-06 4om5-a1-m1-cA_4om5-a1-m1-cC
38 4om5-a1-m1-cB 60 59 0.3108 0.3833 0.3898 4.10e-06 4om5-a1-m1-cA_4om5-a1-m1-cB
39 4om5-a1-m1-cA 60 59 0.3108 0.3833 0.3898 4.10e-06 4om5-a1-m1-cA_4om5-a1-m1-cB, 4om5-a1-m1-cA_4om5-a1-m1-cC
40 1xt3-a1-m2-cB 60 59 0.3108 0.3833 0.3898 5.68e-06 1xt3-a1-m1-cA_1xt3-a1-m2-cB
41 1xt3-a1-m1-cA 60 59 0.3108 0.3833 0.3898 5.68e-06 1xt3-a1-m1-cA_1xt3-a1-m2-cB
42 5xwe-a1-m1-cB 50 58 0.2703 0.4000 0.3448 7.51e-06 5xwe-a1-m1-cB_5xwe-a1-m1-cA
43 5xwe-a1-m1-cA 51 56 0.2703 0.3922 0.3571 9.43e-06 5xwe-a1-m1-cB_5xwe-a1-m1-cA
44 3vts-a1-m1-cB 61 67 0.3108 0.3770 0.3433 1.70e-05 3vts-a1-m1-cA_3vts-a1-m1-cB
45 3vts-a1-m1-cA 61 67 0.3108 0.3770 0.3433 1.70e-05 3vts-a1-m1-cA_3vts-a1-m1-cB
46 4zqy-a2-m1-cC 65 67 0.3378 0.3846 0.3731 2.22e-05 4zqy-a2-m1-cB_4zqy-a2-m1-cC
47 4zqy-a2-m1-cB 65 67 0.3378 0.3846 0.3731 2.22e-05 4zqy-a2-m1-cB_4zqy-a2-m1-cC
48 1tgx-a4-m15-cC 60 58 0.2973 0.3667 0.3793 5.75e-05 1tgx-a4-m14-cB_1tgx-a4-m15-cC
49 1tgx-a4-m14-cB 60 58 0.2973 0.3667 0.3793 5.75e-05 1tgx-a4-m14-cB_1tgx-a4-m15-cC
50 1tgx-a3-m9-cA 60 58 0.2973 0.3667 0.3793 5.75e-05 1tgx-a3-m10-cB_1tgx-a3-m9-cA
51 1tgx-a3-m10-cB 60 58 0.2973 0.3667 0.3793 5.75e-05 1tgx-a3-m10-cB_1tgx-a3-m9-cA
52 1tgx-a1-m4-cC 60 58 0.2973 0.3667 0.3793 5.75e-05 1tgx-a1-m4-cA_1tgx-a1-m4-cC
53 1tgx-a1-m4-cA 60 58 0.2973 0.3667 0.3793 5.75e-05 1tgx-a1-m4-cA_1tgx-a1-m4-cC
54 7c28-a1-m1-cB 59 52 0.2703 0.3390 0.3846 0.019 7c28-a1-m1-cB_7c28-a1-m1-cA
55 7c28-a1-m1-cA 65 52 0.2703 0.3077 0.3846 0.021 7c28-a1-m1-cB_7c28-a1-m1-cA
56 4bdt-a2-m6-cB 61 63 0.3514 0.4262 0.4127 0.83 4bdt-a2-m4-cB_4bdt-a2-m6-cB
57 4bdt-a2-m4-cB 61 63 0.3514 0.4262 0.4127 0.83 4bdt-a2-m4-cB_4bdt-a2-m6-cB
58 1fsc-a1-m2-cA 61 63 0.3514 0.4262 0.4127 0.83 1fsc-a1-m1-cA_1fsc-a1-m2-cA
59 1fsc-a1-m1-cA 61 63 0.3514 0.4262 0.4127 0.83 1fsc-a1-m1-cA_1fsc-a1-m2-cA
60 1flc-a1-m1-cE 427 57 0.2162 0.0375 0.2807 3.9 1flc-a1-m1-cC_1flc-a1-m1-cE
61 1flc-a1-m1-cC 427 57 0.2162 0.0375 0.2807 3.9 1flc-a1-m1-cC_1flc-a1-m1-cE
62 7v63-a1-m1-cB 190 33 0.1486 0.0579 0.3333 3.9 7v63-a1-m1-cA_7v63-a1-m1-cB
63 1zfn-a4-m4-cD 235 17 0.1216 0.0383 0.5294 7.6 1zfn-a4-m4-cD_1zfn-a4-m4-cA, 1zfn-a4-m4-cD_1zfn-a4-m4-cC
64 6xf9-a1-m1-cE 425 42 0.1486 0.0259 0.2619 9.9 6xf9-a1-m1-cE_6xf9-a1-m1-cD
65 6xf9-a1-m1-cD 426 42 0.1486 0.0258 0.2619 10.0 6xf9-a1-m1-cE_6xf9-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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