Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
IVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILSGGRGGWEEWDKKIEELIKKSEELIK
KIEEQIKKQE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5cn0-a1-m3-cA 70 70 1.0000 1.0000 1.0000 1.02e-41 5cn0-a1-m2-cA_5cn0-a1-m3-cA
2 5cn0-a1-m2-cA 70 70 1.0000 1.0000 1.0000 1.02e-41 5cn0-a1-m2-cA_5cn0-a1-m3-cA
3 3wfv-a1-m3-cA 86 70 0.6000 0.4884 0.6000 2.24e-21 3wfv-a1-m2-cA_3wfv-a1-m3-cA
4 3wfv-a1-m2-cA 86 70 0.6000 0.4884 0.6000 2.24e-21 3wfv-a1-m2-cA_3wfv-a1-m3-cA
5 3vgy-a1-m3-cC 49 35 0.4857 0.6939 0.9714 5.06e-17 3vgy-a1-m1-cC_3vgy-a1-m3-cC
6 3vgy-a1-m1-cC 49 35 0.4857 0.6939 0.9714 5.06e-17 3vgy-a1-m1-cC_3vgy-a1-m3-cC
7 4kht-a2-m3-cA 66 34 0.4857 0.5152 1.0000 6.72e-17 4kht-a2-m2-cA_4kht-a2-m3-cA
8 4kht-a2-m2-cA 66 34 0.4857 0.5152 1.0000 6.72e-17 4kht-a2-m2-cA_4kht-a2-m3-cA
9 2kp8-a1-m1-cC 72 35 0.4857 0.4722 0.9714 9.00e-17 2kp8-a1-m1-cB_2kp8-a1-m1-cC
10 2kp8-a1-m1-cB 72 35 0.4857 0.4722 0.9714 9.00e-17 2kp8-a1-m1-cB_2kp8-a1-m1-cC
11 7ska-a1-m1-cZ 142 35 0.4571 0.2254 0.9143 2.33e-15 7ska-a1-m1-cO_7ska-a1-m1-cZ
12 7ska-a1-m1-cO 142 35 0.4571 0.2254 0.9143 2.33e-15 7ska-a1-m1-cO_7ska-a1-m1-cZ
13 3p7k-a2-m3-cA 45 35 0.4429 0.6889 0.8857 8.68e-15 3p7k-a2-m2-cA_3p7k-a2-m3-cA
14 3p7k-a2-m2-cA 45 35 0.4429 0.6889 0.8857 8.68e-15 3p7k-a2-m2-cA_3p7k-a2-m3-cA
15 7n6w-a1-m1-cC 585 38 0.4571 0.0547 0.8421 5.47e-14 7n6w-a1-m1-cC_7n6w-a1-m1-cA
16 7n6w-a1-m1-cA 591 35 0.4429 0.0525 0.8857 5.47e-14 7n6w-a1-m1-cC_7n6w-a1-m1-cA
17 5fyj-a1-m3-cB 154 35 0.4429 0.2013 0.8857 6.38e-14 5fyj-a1-m2-cB_5fyj-a1-m3-cB
18 5fyj-a1-m2-cB 154 35 0.4429 0.2013 0.8857 6.38e-14 5fyj-a1-m2-cB_5fyj-a1-m3-cB
19 3cp1-a1-m3-cA 73 70 0.5286 0.5068 0.5286 7.83e-14 3cp1-a1-m2-cA_3cp1-a1-m3-cA
20 3cp1-a1-m2-cA 73 70 0.5286 0.5068 0.5286 7.83e-14 3cp1-a1-m2-cA_3cp1-a1-m3-cA
21 3k9a-a1-m3-cA 82 70 0.5286 0.4512 0.5286 2.88e-13 3k9a-a1-m2-cA_3k9a-a1-m3-cA
22 3k9a-a1-m2-cA 82 70 0.5286 0.4512 0.5286 2.88e-13 3k9a-a1-m2-cA_3k9a-a1-m3-cA
23 2zfc-a1-m1-cC 44 35 0.3429 0.5455 0.6857 1.60e-11 2zfc-a1-m1-cA_2zfc-a1-m1-cC
24 2zfc-a1-m1-cA 44 35 0.3429 0.5455 0.6857 1.60e-11 2zfc-a1-m1-cA_2zfc-a1-m1-cC
25 6nij-a1-m1-cB 140 35 0.3714 0.1857 0.7429 3.79e-08 6nij-a1-m1-cF_6nij-a1-m1-cB
26 6nij-a1-m1-cF 139 35 0.3571 0.1799 0.7143 2.71e-07 6nij-a1-m1-cF_6nij-a1-m1-cB
27 7mxd-a1-m1-cI 136 35 0.3429 0.1765 0.6857 3.84e-07 7mxd-a1-m1-cB_7mxd-a1-m1-cI
28 7mxd-a1-m1-cB 136 35 0.3429 0.1765 0.6857 3.84e-07 7mxd-a1-m1-cB_7mxd-a1-m1-cI
29 1jq0-a1-m3-cA 71 40 0.2857 0.2817 0.5000 9.22e-06 1jq0-a1-m2-cA_1jq0-a1-m3-cA
30 1jq0-a1-m2-cA 71 40 0.2857 0.2817 0.5000 9.22e-06 1jq0-a1-m2-cA_1jq0-a1-m3-cA
31 6wix-a1-m3-cB 120 22 0.2429 0.1417 0.7727 1.86e-05 6wix-a1-m2-cB_6wix-a1-m3-cB
32 6wix-a1-m2-cB 120 22 0.2429 0.1417 0.7727 1.86e-05 6wix-a1-m2-cB_6wix-a1-m3-cB
33 7ucg-a1-m1-cM 134 35 0.3000 0.1567 0.6000 1.32e-04 7ucg-a1-m1-cB_7ucg-a1-m1-cM
34 7ucg-a1-m1-cB 134 35 0.3000 0.1567 0.6000 1.32e-04 7ucg-a1-m1-cB_7ucg-a1-m1-cM
35 6ccb-a2-m5-cB 131 32 0.2857 0.1527 0.6250 1.58e-04 6ccb-a2-m3-cB_6ccb-a2-m5-cB
36 6ccb-a2-m3-cB 131 32 0.2857 0.1527 0.6250 1.58e-04 6ccb-a2-m3-cB_6ccb-a2-m5-cB
37 7rso-a1-m1-cF 124 25 0.2286 0.1290 0.6400 4.96e-04 7rso-a1-m1-cE_7rso-a1-m1-cF
38 7rso-a1-m1-cE 124 25 0.2286 0.1290 0.6400 4.96e-04 7rso-a1-m1-cE_7rso-a1-m1-cF
39 6dcq-a1-m1-cF 139 32 0.2857 0.1439 0.6250 0.003 6dcq-a1-m1-cB_6dcq-a1-m1-cF
40 6mzj-a1-m1-cE 550 27 0.2000 0.0255 0.5185 0.020 6mzj-a1-m1-cB_6mzj-a1-m1-cE
41 6mzj-a1-m1-cB 550 27 0.2000 0.0255 0.5185 0.020 6mzj-a1-m1-cB_6mzj-a1-m1-cE
42 7ur6-a1-m1-cI 132 25 0.2143 0.1136 0.6000 0.049 7ur6-a1-m1-cC_7ur6-a1-m1-cI
43 7ur6-a1-m1-cC 132 25 0.2143 0.1136 0.6000 0.049 7ur6-a1-m1-cC_7ur6-a1-m1-cI
44 6ohy-a1-m1-cF 120 15 0.1714 0.1000 0.8000 0.12 6ohy-a1-m1-cF_6ohy-a1-m1-cE
45 6ohy-a1-m1-cE 120 15 0.1714 0.1000 0.8000 0.12 6ohy-a1-m1-cF_6ohy-a1-m1-cE
46 6vo3-a1-m1-cF 124 14 0.1714 0.0968 0.8571 0.14 6vo3-a1-m1-cE_6vo3-a1-m1-cF
47 6vo3-a1-m1-cE 124 14 0.1714 0.0968 0.8571 0.14 6vo3-a1-m1-cE_6vo3-a1-m1-cF
48 6p65-a1-m1-cE 557 25 0.2000 0.0251 0.5600 0.45 6p65-a1-m1-cE_6p65-a1-m1-cB
49 6p65-a1-m1-cB 557 25 0.2000 0.0251 0.5600 0.45 6p65-a1-m1-cE_6p65-a1-m1-cB
50 1jpx-a1-m3-cA 59 41 0.2143 0.2542 0.3659 1.0 1jpx-a1-m2-cA_1jpx-a1-m3-cA
51 1jpx-a1-m2-cA 59 41 0.2143 0.2542 0.3659 1.0 1jpx-a1-m2-cA_1jpx-a1-m3-cA
52 4zhj-a1-m1-cA 1258 56 0.2286 0.0127 0.2857 1.4 4zhj-a1-m1-cB_4zhj-a1-m1-cA
53 4zhj-a1-m1-cB 1233 56 0.2286 0.0130 0.2857 1.6 4zhj-a1-m1-cB_4zhj-a1-m1-cA
54 1m3w-a1-m1-cD 30 30 0.2429 0.5667 0.5667 4.5 1m3w-a1-m1-cB_1m3w-a1-m1-cD, 1m3w-a1-m1-cC_1m3w-a1-m1-cD
55 1m3w-a1-m1-cC 30 30 0.2429 0.5667 0.5667 4.5 1m3w-a1-m1-cC_1m3w-a1-m1-cD
56 1m3w-a1-m1-cB 30 30 0.2429 0.5667 0.5667 4.5 1m3w-a1-m1-cB_1m3w-a1-m1-cD
57 8hdu-a1-m1-cD 157 22 0.1714 0.0764 0.5455 4.9 8hdu-a1-m1-cE_8hdu-a1-m1-cD
58 8hdu-a1-m1-cE 154 22 0.1714 0.0779 0.5455 5.1 8hdu-a1-m1-cE_8hdu-a1-m1-cC, 8hdu-a1-m1-cE_8hdu-a1-m1-cD
59 3e4o-a2-m3-cB 250 53 0.2000 0.0560 0.2642 5.7 3e4o-a2-m1-cB_3e4o-a2-m3-cB
60 3e4o-a2-m1-cB 250 53 0.2000 0.0560 0.2642 5.7 3e4o-a2-m1-cB_3e4o-a2-m3-cB
61 3e4p-a1-m1-cB 253 53 0.2000 0.0553 0.2642 5.7 3e4p-a1-m1-cB_3e4p-a1-m1-cA
62 3e4p-a1-m1-cA 254 53 0.2000 0.0551 0.2642 5.7 3e4p-a1-m1-cB_3e4p-a1-m1-cA
63 1dys-a1-m1-cB 345 42 0.1857 0.0377 0.3095 8.2 1dys-a1-m1-cA_1dys-a1-m1-cB
64 1dys-a1-m1-cA 345 42 0.1857 0.0377 0.3095 8.2 1dys-a1-m1-cA_1dys-a1-m1-cB
65 7q5s-a1-m1-cK 2039 46 0.2429 0.0083 0.3696 8.6 7q5s-a1-m1-cI_7q5s-a1-m1-cK
66 7q5s-a1-m1-cI 2039 46 0.2429 0.0083 0.3696 8.6 7q5s-a1-m1-cI_7q5s-a1-m1-cK
67 7lld-a1-m1-cB 445 19 0.1286 0.0202 0.4737 9.8 7lld-a1-m1-cB_7lld-a1-m1-cA
68 7lld-a1-m1-cA 446 19 0.1286 0.0202 0.4737 9.8 7lld-a1-m1-cB_7lld-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600