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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
IVTTTSGIQGKEIIEYIDIVNGEAIGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAD
EKELAKQKGANAIVGVDVDYEVVRDGLVAVSGTAVRI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2gtc-a1-m1-cE 97 97 1.0000 1.0000 1.0000 4.68e-62 2gtc-a1-m1-cD_2gtc-a1-m1-cE
2 2gtc-a1-m1-cD 97 97 1.0000 1.0000 1.0000 4.68e-62 2gtc-a1-m1-cD_2gtc-a1-m1-cE
3 1vr4-a1-m1-cC 99 102 0.9485 0.9293 0.9020 5.53e-50 1vr4-a1-m1-cB_1vr4-a1-m1-cC
4 1vr4-a1-m1-cB 82 102 0.7732 0.9146 0.7353 2.84e-34 1vr4-a1-m1-cB_1vr4-a1-m1-cC
5 1y2i-a1-m1-cE 106 101 0.5773 0.5283 0.5545 5.46e-28 1y2i-a1-m1-cD_1y2i-a1-m1-cE
6 1y2i-a1-m1-cD 106 101 0.5773 0.5283 0.5545 5.46e-28 1y2i-a1-m1-cD_1y2i-a1-m1-cE
7 5g6m-a1-m2-cA 362 26 0.1134 0.0304 0.4231 1.1 5g6m-a1-m1-cA_5g6m-a1-m2-cA
8 5g6m-a1-m1-cA 362 26 0.1134 0.0304 0.4231 1.1 5g6m-a1-m1-cA_5g6m-a1-m2-cA
9 6g0k-a1-m1-cC 595 46 0.1649 0.0269 0.3478 4.3 6g0k-a1-m1-cC_6g0k-a1-m1-cA
10 6g0k-a1-m1-cA 629 46 0.1649 0.0254 0.3478 4.5 6g0k-a1-m1-cB_6g0k-a1-m1-cA, 6g0k-a1-m1-cC_6g0k-a1-m1-cA
11 3a44-a2-m1-cD 127 63 0.2268 0.1732 0.3492 4.7 3a44-a2-m1-cC_3a44-a2-m1-cD
12 6g0k-a1-m1-cB 609 46 0.1649 0.0263 0.3478 4.8 6g0k-a1-m1-cB_6g0k-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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