Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
KAIVVQPKDTVDRVAKILSRNKAGSAVVEGDEILGVVTERDILDKVVAKGKNPKEVKVEE
ITKNPVKI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ghd-a3-m2-cB 68 68 1.0000 1.0000 1.0000 1.38e-40 3ghd-a3-m1-cB_3ghd-a3-m2-cB
2 3ghd-a3-m1-cB 68 68 1.0000 1.0000 1.0000 1.38e-40 3ghd-a3-m1-cB_3ghd-a3-m2-cB
3 3ghd-a2-m1-cB 68 68 1.0000 1.0000 1.0000 1.38e-40 3ghd-a2-m1-cA_3ghd-a2-m1-cB
4 3ghd-a2-m1-cA 68 68 1.0000 1.0000 1.0000 1.38e-40 3ghd-a2-m1-cA_3ghd-a2-m1-cB
5 3ghd-a1-m2-cB 68 68 1.0000 1.0000 1.0000 1.38e-40 3ghd-a1-m1-cA_3ghd-a1-m2-cB
6 3ghd-a1-m1-cA 68 68 1.0000 1.0000 1.0000 1.38e-40 3ghd-a1-m1-cA_3ghd-a1-m2-cB
7 4fry-a1-m1-cB 138 64 0.3676 0.1812 0.3906 1.92e-05 4fry-a1-m1-cA_4fry-a1-m1-cB
8 4fry-a1-m1-cA 136 64 0.3676 0.1838 0.3906 2.04e-05 4fry-a1-m1-cA_4fry-a1-m1-cB
9 2ef7-a1-m2-cA 121 58 0.3235 0.1818 0.3793 3.23e-04 2ef7-a1-m2-cB_2ef7-a1-m2-cA
10 2ef7-a1-m1-cA 121 58 0.3235 0.1818 0.3793 3.23e-04 2ef7-a1-m2-cB_2ef7-a1-m1-cA
11 2ef7-a1-m2-cB 120 58 0.3235 0.1833 0.3793 3.29e-04 2ef7-a1-m2-cB_2ef7-a1-m1-cA, 2ef7-a1-m2-cB_2ef7-a1-m2-cA
12 3fhm-a2-m1-cC 134 68 0.3088 0.1567 0.3088 0.026 3fhm-a2-m1-cB_3fhm-a2-m1-cC
13 3fhm-a2-m1-cB 126 68 0.3088 0.1667 0.3088 0.032 3fhm-a2-m1-cB_3fhm-a2-m1-cC
14 1pvm-a1-m1-cA 178 59 0.2500 0.0955 0.2881 0.034 1pvm-a1-m1-cA_1pvm-a1-m1-cB
15 1pvm-a1-m1-cB 184 59 0.2500 0.0924 0.2881 0.035 1pvm-a1-m1-cA_1pvm-a1-m1-cB
16 1xkf-a2-m1-cB 123 65 0.2353 0.1301 0.2462 0.039 1xkf-a2-m1-cA_1xkf-a2-m1-cB
17 1pbj-a2-m2-cA 116 73 0.3971 0.2328 0.3699 0.073 1pbj-a2-m1-cA_1pbj-a2-m2-cA
18 1pbj-a2-m1-cA 116 73 0.3971 0.2328 0.3699 0.073 1pbj-a2-m1-cA_1pbj-a2-m2-cA
19 2rc3-a2-m1-cC 128 65 0.2794 0.1484 0.2923 0.12 2rc3-a2-m1-cB_2rc3-a2-m1-cC
20 5g5x-a1-m2-cA 119 56 0.2647 0.1513 0.3214 0.13 5g5x-a1-m1-cA_5g5x-a1-m2-cA
21 5g5x-a1-m1-cA 119 56 0.2647 0.1513 0.3214 0.13 5g5x-a1-m1-cA_5g5x-a1-m2-cA
22 5g5r-a1-m2-cA 122 56 0.2647 0.1475 0.3214 0.15 5g5r-a1-m1-cA_5g5r-a1-m2-cA
23 5g5r-a1-m1-cA 122 56 0.2647 0.1475 0.3214 0.15 5g5r-a1-m1-cA_5g5r-a1-m2-cA
24 4esy-a1-m1-cB 159 41 0.2059 0.0881 0.3415 0.18 4esy-a1-m1-cB_4esy-a1-m1-cA
25 1xkf-a2-m1-cA 120 60 0.2353 0.1333 0.2667 0.21 1xkf-a2-m1-cA_1xkf-a2-m1-cB
26 3k2v-a1-m1-cB 121 51 0.1912 0.1074 0.2549 0.36 3k2v-a1-m1-cB_3k2v-a1-m1-cA
27 3k2v-a1-m1-cA 123 51 0.1912 0.1057 0.2549 0.37 3k2v-a1-m1-cB_3k2v-a1-m1-cA
28 4esy-a1-m1-cA 160 42 0.2206 0.0938 0.3571 0.51 4esy-a1-m1-cB_4esy-a1-m1-cA
29 4mbq-a2-m1-cC 51 22 0.1324 0.1765 0.4091 0.87 4mbq-a2-m1-cC_4mbq-a2-m1-cD
30 4mbq-a2-m1-cD 51 22 0.1324 0.1765 0.4091 0.91 4mbq-a2-m1-cC_4mbq-a2-m1-cD, 4mbq-a2-m1-cF_4mbq-a2-m1-cD
31 6gk9-a1-m1-cD 424 26 0.1912 0.0307 0.5000 0.92 6gk9-a1-m1-cC_6gk9-a1-m1-cD
32 6gk9-a1-m1-cE 424 26 0.1912 0.0307 0.5000 0.93 6gk9-a1-m1-cC_6gk9-a1-m1-cE
33 4mbq-a2-m1-cF 50 22 0.1324 0.1800 0.4091 0.95 4mbq-a2-m1-cF_4mbq-a2-m1-cD
34 2rc3-a2-m1-cB 127 41 0.1765 0.0945 0.2927 2.4 2rc3-a2-m1-cB_2rc3-a2-m1-cC
35 1wv8-a1-m2-cA 70 34 0.1765 0.1714 0.3529 2.9 1wv8-a1-m1-cA_1wv8-a1-m2-cA
36 1wv8-a1-m1-cA 70 34 0.1765 0.1714 0.3529 2.9 1wv8-a1-m1-cA_1wv8-a1-m2-cA
37 4fxs-a1-m4-cA 452 59 0.3088 0.0465 0.3559 2.9 4fxs-a1-m2-cA_4fxs-a1-m4-cA
38 4fxs-a1-m2-cA 452 59 0.3088 0.0465 0.3559 2.9 4fxs-a1-m2-cA_4fxs-a1-m4-cA
39 7thk-a1-m1-cA 860 70 0.2941 0.0233 0.2857 3.1 7thk-a1-m1-cA_7thk-a1-m1-cB
40 5awe-a1-m4-cA 195 29 0.1618 0.0564 0.3793 3.4 5awe-a1-m1-cA_5awe-a1-m4-cA, 5awe-a1-m2-cA_5awe-a1-m4-cA, 5awe-a1-m3-cA_5awe-a1-m4-cA
41 5awe-a1-m3-cA 195 29 0.1618 0.0564 0.3793 3.4 5awe-a1-m3-cA_5awe-a1-m4-cA
42 5awe-a1-m2-cA 195 29 0.1618 0.0564 0.3793 3.4 5awe-a1-m2-cA_5awe-a1-m4-cA
43 5awe-a1-m1-cA 195 29 0.1618 0.0564 0.3793 3.4 5awe-a1-m1-cA_5awe-a1-m4-cA
44 6n7e-a1-m1-cD 319 37 0.1471 0.0313 0.2703 4.4 6n7e-a1-m1-cA_6n7e-a1-m1-cD
45 4ua1-a1-m1-cA 124 47 0.2353 0.1290 0.3404 4.8 4ua1-a1-m1-cA_4ua1-a1-m1-cB
46 4ua1-a1-m1-cB 125 47 0.2353 0.1280 0.3404 4.9 4ua1-a1-m1-cA_4ua1-a1-m1-cB
47 3jtx-a1-m1-cB 387 51 0.2500 0.0439 0.3333 5.1 3jtx-a1-m1-cA_3jtx-a1-m1-cB
48 5ep8-a1-m1-cB 433 42 0.1912 0.0300 0.3095 7.1 5ep8-a1-m1-cA_5ep8-a1-m1-cB
49 5ep8-a1-m1-cA 433 42 0.1912 0.0300 0.3095 7.1 5ep8-a1-m1-cA_5ep8-a1-m1-cB
50 4noc-a2-m2-cC 144 45 0.2647 0.1250 0.4000 7.7 4noc-a2-m1-cC_4noc-a2-m2-cC
51 4noc-a2-m1-cC 144 45 0.2647 0.1250 0.4000 7.7 4noc-a2-m1-cC_4noc-a2-m2-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600