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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
KALSKLSEREAMVLKMRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKLKYHESRT
RKLRDFLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ku7-a1-m1-cD 68 68 1.0000 1.0000 1.0000 2.49e-43 1ku7-a1-m1-cD_1ku7-a1-m1-cA
2 1ku7-a1-m1-cA 73 68 1.0000 0.9315 1.0000 2.59e-43 1ku7-a1-m1-cD_1ku7-a1-m1-cA
3 8cwr-a1-m3-cB 109 68 0.5588 0.3486 0.5588 2.97e-20 8cwr-a1-m2-cB_8cwr-a1-m3-cB
4 8cwr-a1-m2-cB 109 68 0.5588 0.3486 0.5588 2.97e-20 8cwr-a1-m2-cB_8cwr-a1-m3-cB
5 2p7v-a2-m2-cB 68 67 0.5882 0.5882 0.5970 4.17e-18 2p7v-a2-m1-cB_2p7v-a2-m2-cB
6 2p7v-a2-m1-cB 68 67 0.5882 0.5882 0.5970 4.17e-18 2p7v-a2-m1-cB_2p7v-a2-m2-cB
7 3hd6-a1-m3-cA 403 52 0.2500 0.0422 0.3269 1.9 3hd6-a1-m2-cA_3hd6-a1-m3-cA
8 3hd6-a1-m2-cA 403 52 0.2500 0.0422 0.3269 1.9 3hd6-a1-m2-cA_3hd6-a1-m3-cA
9 8f6k-a1-m1-cD 287 25 0.1618 0.0383 0.4400 7.0 8f6k-a1-m1-cA_8f6k-a1-m1-cD, 8f6k-a1-m1-cB_8f6k-a1-m1-cD, 8f6k-a1-m1-cC_8f6k-a1-m1-cD
10 8f6k-a1-m1-cB 287 25 0.1618 0.0383 0.4400 7.0 8f6k-a1-m1-cB_8f6k-a1-m1-cD
11 3j1z-a1-m9-cQ 296 25 0.1618 0.0372 0.4400 7.0 3j1z-a1-m1-cP_3j1z-a1-m9-cQ, 3j1z-a1-m12-cP_3j1z-a1-m9-cQ, 3j1z-a1-m9-cP_3j1z-a1-m9-cQ
12 3j1z-a1-m9-cP 296 25 0.1618 0.0372 0.4400 7.0 3j1z-a1-m14-cP_3j1z-a1-m9-cP, 3j1z-a1-m9-cP_3j1z-a1-m9-cQ
13 3j1z-a1-m14-cP 296 25 0.1618 0.0372 0.4400 7.0 3j1z-a1-m14-cP_3j1z-a1-m9-cP
14 3j1z-a1-m12-cP 296 25 0.1618 0.0372 0.4400 7.0 3j1z-a1-m12-cP_3j1z-a1-m9-cQ
15 3j1z-a1-m1-cP 296 25 0.1618 0.0372 0.4400 7.0 3j1z-a1-m1-cP_3j1z-a1-m9-cQ
16 8f6i-a1-m1-cA 274 25 0.1618 0.0401 0.4400 7.6 8f6i-a1-m1-cA_8f6i-a1-m1-cB
17 8f6k-a1-m1-cC 279 25 0.1618 0.0394 0.4400 7.7 8f6k-a1-m1-cC_8f6k-a1-m1-cD
18 8f6k-a1-m1-cA 279 25 0.1618 0.0394 0.4400 7.7 8f6k-a1-m1-cA_8f6k-a1-m1-cD
19 8f6i-a1-m1-cB 276 25 0.1618 0.0399 0.4400 7.8 8f6i-a1-m1-cA_8f6i-a1-m1-cB
20 4mky-a2-m1-cD 284 22 0.1471 0.0352 0.4545 9.6 4mky-a2-m1-cC_4mky-a2-m1-cD
21 4mky-a2-m1-cC 284 22 0.1471 0.0352 0.4545 9.6 4mky-a2-m1-cC_4mky-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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