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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
KDEKDHLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADD
CEFLRAELDELRRQRE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3i00-a1-m1-cA 76 76 1.0000 1.0000 1.0000 1.22e-48 3i00-a1-m1-cA_3i00-a1-m2-cB
2 3i00-a1-m2-cB 80 76 1.0000 0.9500 1.0000 1.42e-48 3i00-a1-m1-cA_3i00-a1-m2-cB
3 2qa7-a2-m1-cC 102 75 0.9868 0.7353 1.0000 3.32e-48 2qa7-a2-m1-cD_2qa7-a2-m1-cC
4 2qa7-a2-m1-cD 70 70 0.9211 1.0000 1.0000 1.57e-44 2qa7-a2-m1-cD_2qa7-a2-m1-cC
5 1hyu-a1-m2-cA 521 26 0.1447 0.0211 0.4231 2.1 1hyu-a1-m1-cA_1hyu-a1-m2-cA
6 1hyu-a1-m1-cA 521 26 0.1447 0.0211 0.4231 2.1 1hyu-a1-m1-cA_1hyu-a1-m2-cA
7 6ofp-a1-m1-cB 92 52 0.2105 0.1739 0.3077 2.4 6ofp-a1-m1-cA_6ofp-a1-m1-cB
8 6ofp-a1-m1-cA 91 52 0.2105 0.1758 0.3077 2.5 6ofp-a1-m1-cA_6ofp-a1-m1-cB
9 2xsj-a1-m1-cE 385 42 0.1842 0.0364 0.3333 7.2 2xsj-a1-m1-cB_2xsj-a1-m1-cE
10 2xsj-a1-m1-cB 385 42 0.1842 0.0364 0.3333 7.2 2xsj-a1-m1-cB_2xsj-a1-m1-cE
11 5to5-a1-m1-cB 140 61 0.2368 0.1286 0.2951 7.7 5to5-a1-m1-cB_5to5-a1-m1-cA
12 5to5-a1-m1-cA 141 61 0.2368 0.1277 0.2951 7.8 5to5-a1-m1-cB_5to5-a1-m1-cA
13 4xvg-a1-m2-cA 519 26 0.1447 0.0212 0.4231 7.9 4xvg-a1-m1-cA_4xvg-a1-m2-cA
14 4xvg-a1-m1-cA 519 26 0.1447 0.0212 0.4231 7.9 4xvg-a1-m1-cA_4xvg-a1-m2-cA
15 4ykg-a1-m2-cA 520 26 0.1447 0.0212 0.4231 7.9 4ykg-a1-m1-cA_4ykg-a1-m2-cA
16 4ykg-a1-m1-cA 520 26 0.1447 0.0212 0.4231 7.9 4ykg-a1-m1-cA_4ykg-a1-m2-cA
17 4ine-a1-m1-cB 428 39 0.1316 0.0234 0.2564 8.6 4ine-a1-m1-cB_4ine-a1-m1-cA
18 4ine-a1-m1-cA 431 39 0.1316 0.0232 0.2564 9.2 4ine-a1-m1-cB_4ine-a1-m1-cA
19 5to6-a1-m1-cB 139 61 0.2368 0.1295 0.2951 9.3 5to6-a1-m1-cB_5to6-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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