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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
KDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDG
KQVTCLHDFFGDDDVFIACGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6fnz-a2-m1-cB 81 81 1.0000 1.0000 1.0000 1.10e-54 6fnz-a2-m1-cD_6fnz-a2-m1-cB
2 6fnz-a2-m1-cD 79 79 0.9753 1.0000 1.0000 2.68e-53 6fnz-a2-m1-cD_6fnz-a2-m1-cB
3 2bqq-a1-m2-cA 96 60 0.2222 0.1875 0.3000 0.58 2bqq-a1-m1-cA_2bqq-a1-m2-cA
4 2bqq-a1-m1-cA 96 60 0.2222 0.1875 0.3000 0.58 2bqq-a1-m1-cA_2bqq-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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