Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=50)
KDIMGDKTVRVRADLHHIIKIETAKNGGNVKEVMDQALEEYIRKYLPDKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2cax-a1-m1-cA 53 50 1.0000 0.9434 1.0000 2.92e-31 2cax-a1-m1-cB_2cax-a1-m1-cA
2 2bnw-a1-m1-cC 53 50 1.0000 0.9434 1.0000 2.92e-31 2bnw-a1-m1-cB_2bnw-a1-m1-cC
3 2bnw-a1-m1-cB 53 50 1.0000 0.9434 1.0000 2.92e-31 2bnw-a1-m1-cB_2bnw-a1-m1-cC
4 2cax-a1-m1-cB 50 50 1.0000 1.0000 1.0000 3.58e-31 2cax-a1-m1-cB_2cax-a1-m1-cA
5 1rqg-a1-m2-cA 606 49 0.2800 0.0231 0.2857 0.33 1rqg-a1-m1-cA_1rqg-a1-m2-cA
6 1rqg-a1-m1-cA 606 49 0.2800 0.0231 0.2857 0.33 1rqg-a1-m1-cA_1rqg-a1-m2-cA
7 2kel-a1-m1-cB 46 31 0.2000 0.2174 0.3226 1.3 2kel-a1-m1-cA_2kel-a1-m1-cB
8 2kel-a1-m1-cA 46 31 0.2000 0.2174 0.3226 1.3 2kel-a1-m1-cA_2kel-a1-m1-cB
9 1wp1-a2-m5-cB 405 34 0.2800 0.0346 0.4118 2.0 1wp1-a2-m4-cB_1wp1-a2-m5-cB
10 1wp1-a2-m4-cB 405 34 0.2800 0.0346 0.4118 2.0 1wp1-a2-m4-cB_1wp1-a2-m5-cB
11 2k6l-a1-m1-cB 51 41 0.2000 0.1961 0.2439 6.3 2k6l-a1-m1-cA_2k6l-a1-m1-cB
12 2k6l-a1-m1-cA 51 41 0.2000 0.1961 0.2439 6.3 2k6l-a1-m1-cA_2k6l-a1-m1-cB
13 3or1-a1-m1-cE 385 20 0.2000 0.0260 0.5000 6.7 3or1-a1-m1-cB_3or1-a1-m1-cE
14 3or1-a1-m1-cB 385 20 0.2000 0.0260 0.5000 6.7 3or1-a1-m1-cB_3or1-a1-m1-cE
15 7va8-a1-m1-cB 439 41 0.2200 0.0251 0.2683 7.1 7va8-a1-m1-cB_7va8-a1-m1-cA
16 7va8-a1-m1-cA 456 41 0.2200 0.0241 0.2683 7.1 7va8-a1-m1-cB_7va8-a1-m1-cA
17 7dwm-a1-m1-cB 218 50 0.3000 0.0688 0.3000 7.8 7dwm-a1-m1-cA_7dwm-a1-m1-cB
18 7dwm-a1-m1-cA 218 50 0.3000 0.0688 0.3000 8.5 7dwm-a1-m1-cA_7dwm-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600