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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
KDLNLYAKELVDVVNYLMKKNQLVFSRNNKFIYVNTETIKSMLEKRNYDTVDGKLYLWRE
LEWIECAEDRFNKRIKIDGENMYAVVIKYSSYSILKRLY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5vfx-a1-m1-cC 100 99 1.0000 0.9900 1.0000 2.36e-67 5vfx-a1-m1-cD_5vfx-a1-m1-cC
2 5vfx-a1-m1-cD 99 99 1.0000 1.0000 1.0000 2.37e-67 5vfx-a1-m1-cD_5vfx-a1-m1-cC
3 4coq-a1-m2-cB 226 64 0.1515 0.0664 0.2344 0.17 4coq-a1-m1-cA_4coq-a1-m2-cB
4 4coq-a1-m1-cA 225 64 0.1515 0.0667 0.2344 0.18 4coq-a1-m1-cA_4coq-a1-m2-cB
5 7z27-a1-m1-cA 172 69 0.1515 0.0872 0.2174 0.63 7z27-a1-m1-cB_7z27-a1-m1-cA
6 7z27-a1-m1-cB 162 69 0.1414 0.0864 0.2029 1.2 7z27-a1-m1-cB_7z27-a1-m1-cA
7 6m9z-a1-m2-cD 218 27 0.1414 0.0642 0.5185 1.8 6m9z-a1-m1-cD_6m9z-a1-m2-cD, 6m9z-a1-m2-cA_6m9z-a1-m2-cD
8 6m9z-a1-m2-cA 218 27 0.1414 0.0642 0.5185 1.8 6m9z-a1-m2-cA_6m9z-a1-m2-cD
9 6m9z-a1-m1-cD 218 27 0.1414 0.0642 0.5185 1.8 6m9z-a1-m1-cD_6m9z-a1-m2-cD
10 3u7v-a1-m4-cA 502 30 0.1111 0.0219 0.3667 2.6 3u7v-a1-m2-cA_3u7v-a1-m4-cA
11 3u7v-a1-m2-cA 502 30 0.1111 0.0219 0.3667 2.6 3u7v-a1-m2-cA_3u7v-a1-m4-cA
12 6l6p-a1-m1-cC 430 60 0.1919 0.0442 0.3167 5.3 6l6p-a1-m1-cC_6l6p-a1-m1-cB
13 6l6p-a1-m1-cB 433 60 0.1919 0.0439 0.3167 5.4 6l6p-a1-m1-cC_6l6p-a1-m1-cB
14 2x3l-a1-m1-cA 420 46 0.1212 0.0286 0.2609 6.8 2x3l-a1-m1-cA_2x3l-a1-m1-cB
15 2x3l-a1-m1-cB 423 46 0.1212 0.0284 0.2609 6.9 2x3l-a1-m1-cA_2x3l-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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