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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
KDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7vp2-a1-m1-cA 83 58 1.0000 0.6988 1.0000 2.51e-37 7vp2-a1-m1-cB_7vp2-a1-m1-cA
2 7vp2-a1-m1-cB 58 58 1.0000 1.0000 1.0000 4.58e-37 7vp2-a1-m1-cB_7vp2-a1-m1-cA
3 5zkt-a1-m1-cA 54 54 0.7241 0.7778 0.7778 1.97e-24 5zkt-a1-m1-cA_5zkt-a1-m1-cB
4 5zkt-a1-m1-cB 55 54 0.7241 0.7636 0.7778 2.80e-24 5zkt-a1-m1-cA_5zkt-a1-m1-cB
5 7vp3-a4-m1-cN 62 55 0.3276 0.3065 0.3455 2.82e-06 7vp3-a4-m1-cP_7vp3-a4-m1-cN
6 7vp3-a4-m1-cP 61 55 0.3276 0.3115 0.3455 2.88e-06 7vp3-a4-m1-cP_7vp3-a4-m1-cN
7 2ycj-a1-m2-cA 271 44 0.1897 0.0406 0.2500 3.1 2ycj-a1-m1-cA_2ycj-a1-m2-cA
8 2ycj-a1-m1-cA 271 44 0.1897 0.0406 0.2500 3.1 2ycj-a1-m1-cA_2ycj-a1-m2-cA
9 3qze-a2-m1-cD 290 27 0.1724 0.0345 0.3704 5.5 3qze-a2-m1-cC_3qze-a2-m1-cD
10 3qze-a2-m1-cC 290 27 0.1724 0.0345 0.3704 5.5 3qze-a2-m1-cC_3qze-a2-m1-cD
11 4ksf-a1-m4-cA 400 33 0.2241 0.0325 0.3939 6.6 4ksf-a1-m2-cA_4ksf-a1-m4-cA, 4ksf-a1-m3-cA_4ksf-a1-m4-cA
12 4ksf-a1-m3-cA 400 33 0.2241 0.0325 0.3939 6.6 4ksf-a1-m3-cA_4ksf-a1-m4-cA
13 4ksf-a1-m2-cA 400 33 0.2241 0.0325 0.3939 6.6 4ksf-a1-m2-cA_4ksf-a1-m4-cA
14 2wl9-a2-m7-cA 300 36 0.2241 0.0433 0.3611 8.1 2wl9-a2-m6-cA_2wl9-a2-m7-cA
15 2wl9-a2-m6-cA 300 36 0.2241 0.0433 0.3611 8.1 2wl9-a2-m6-cA_2wl9-a2-m7-cA
16 7wrr-a2-m1-cD 650 38 0.2241 0.0200 0.3421 8.6 7wrr-a2-m1-cC_7wrr-a2-m1-cD
17 7wrr-a2-m1-cC 650 38 0.2241 0.0200 0.3421 8.6 7wrr-a2-m1-cC_7wrr-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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