Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
KEIAIQEKDLTLQWRGNTGKLVKVRLKNTRAEWYNKQITEENIQEITTLNIIKNGKSLAL
EVYPEKSIYVKPGRINVPVFFIKTPINRGVFEEIFG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2gmq-a1-m2-cB 96 96 1.0000 1.0000 1.0000 5.55e-65 2gmq-a1-m1-cB_2gmq-a1-m2-cB, 2gmq-a1-m2-cA_2gmq-a1-m2-cB
2 2gmq-a1-m1-cB 96 96 1.0000 1.0000 1.0000 5.55e-65 2gmq-a1-m1-cB_2gmq-a1-m2-cB
3 2gmq-a1-m2-cA 96 96 0.9896 0.9896 0.9896 3.46e-62 2gmq-a1-m2-cA_2gmq-a1-m2-cB
4 5cxo-a1-m1-cA 129 58 0.1875 0.1395 0.3103 0.69 5cxo-a1-m1-cA_5cxo-a1-m1-cB
5 5cxo-a1-m1-cB 134 58 0.1875 0.1343 0.3103 0.71 5cxo-a1-m1-cA_5cxo-a1-m1-cB
6 8hdr-a1-m1-cF 110 36 0.1250 0.1091 0.3333 4.0 8hdr-a1-m1-cE_8hdr-a1-m1-cF
7 8hdr-a1-m1-cE 110 36 0.1250 0.1091 0.3333 4.0 8hdr-a1-m1-cE_8hdr-a1-m1-cF
8 3s9k-a2-m2-cA 114 49 0.1562 0.1316 0.3061 7.0 3s9k-a2-m1-cA_3s9k-a2-m2-cA
9 3s9k-a2-m1-cA 114 49 0.1562 0.1316 0.3061 7.0 3s9k-a2-m1-cA_3s9k-a2-m2-cA
10 6bmn-a1-m1-cA 289 54 0.1875 0.0623 0.3333 9.6 6bmn-a1-m1-cA_6bmn-a1-m1-cB
11 7khm-a1-m1-cA 290 54 0.1875 0.0621 0.3333 9.6 7khm-a1-m1-cB_7khm-a1-m1-cA
12 6bmn-a1-m1-cB 293 54 0.1875 0.0614 0.3333 9.6 6bmn-a1-m1-cA_6bmn-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600