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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
KEKLESKKDEIRCCYKITDTDVAVLLKVEIEKPITSEELADIFKLSKTTVENSLKKLIEL
GLVVRTKTPKYYYSISSNILEKIRNDLLNCAKRELAAT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2d1h-a1-m1-cA 98 98 1.0000 1.0000 1.0000 1.88e-64 2d1h-a1-m1-cB_2d1h-a1-m1-cA
2 2d1h-a1-m1-cB 96 96 0.9796 1.0000 1.0000 4.32e-63 2d1h-a1-m1-cB_2d1h-a1-m1-cA
3 3bpv-a1-m2-cA 137 54 0.2041 0.1460 0.3704 3.09e-06 3bpv-a1-m1-cA_3bpv-a1-m2-cA
4 3bpv-a1-m1-cA 137 54 0.2041 0.1460 0.3704 3.09e-06 3bpv-a1-m1-cA_3bpv-a1-m2-cA
5 2a61-a2-m1-cD 137 87 0.2449 0.1752 0.2759 0.011 2a61-a2-m1-cD_2a61-a2-m1-cC
6 6j0e-a1-m1-cB 125 57 0.1633 0.1280 0.2807 0.012 6j0e-a1-m1-cA_6j0e-a1-m1-cB
7 6j0e-a1-m1-cA 124 57 0.1633 0.1290 0.2807 0.013 6j0e-a1-m1-cA_6j0e-a1-m1-cB
8 3s2w-a1-m1-cA 142 48 0.1531 0.1056 0.3125 0.023 3s2w-a1-m1-cB_3s2w-a1-m1-cA
9 2a61-a2-m1-cC 142 91 0.2551 0.1761 0.2747 0.032 2a61-a2-m1-cD_2a61-a2-m1-cC
10 6o5c-a1-m1-cA 215 84 0.2347 0.1070 0.2738 0.046 6o5c-a1-m2-cB_6o5c-a1-m1-cA
11 3s2w-a1-m1-cB 133 43 0.1429 0.1053 0.3256 0.072 3s2w-a1-m1-cB_3s2w-a1-m1-cA
12 6cmv-a1-m1-cB 112 60 0.2245 0.1964 0.3667 0.12 6cmv-a1-m1-cA_6cmv-a1-m1-cB
13 6cmv-a1-m1-cA 111 60 0.2245 0.1982 0.3667 0.12 6cmv-a1-m1-cA_6cmv-a1-m1-cB
14 2krf-a1-m1-cB 69 34 0.1429 0.2029 0.4118 0.13 2krf-a1-m1-cA_2krf-a1-m1-cB
15 2krf-a1-m1-cA 69 34 0.1429 0.2029 0.4118 0.13 2krf-a1-m1-cA_2krf-a1-m1-cB
16 3r0a-a1-m1-cA 118 87 0.2755 0.2288 0.3103 0.50 3r0a-a1-m1-cA_3r0a-a1-m1-cB
17 3r0a-a1-m1-cB 121 87 0.2755 0.2231 0.3103 0.57 3r0a-a1-m1-cA_3r0a-a1-m1-cB
18 1w19-a1-m2-cD 147 44 0.1327 0.0884 0.2955 0.57 1w19-a1-m1-cB_1w19-a1-m2-cD
19 1w19-a1-m1-cB 147 44 0.1327 0.0884 0.2955 0.57 1w19-a1-m1-cB_1w19-a1-m2-cD, 1w19-a1-m2-cE_1w19-a1-m1-cB
20 1w29-a1-m2-cE 146 44 0.1327 0.0890 0.2955 0.60 1w29-a1-m2-cD_1w29-a1-m2-cE
21 1w29-a1-m2-cD 146 44 0.1327 0.0890 0.2955 0.60 1w29-a1-m2-cD_1w29-a1-m2-cE
22 1w19-a1-m2-cE 146 44 0.1327 0.0890 0.2955 0.60 1w19-a1-m2-cE_1w19-a1-m1-cB
23 2hoe-a1-m2-cA 346 42 0.1735 0.0491 0.4048 0.88 2hoe-a1-m1-cA_2hoe-a1-m2-cA
24 2hoe-a1-m1-cA 346 42 0.1735 0.0491 0.4048 0.88 2hoe-a1-m1-cA_2hoe-a1-m2-cA
25 1lj9-a1-m1-cA 144 36 0.1327 0.0903 0.3611 1.3 1lj9-a1-m1-cB_1lj9-a1-m1-cA
26 1lj9-a1-m1-cB 142 36 0.1327 0.0915 0.3611 1.3 1lj9-a1-m1-cB_1lj9-a1-m1-cA
27 3edp-a1-m1-cB 214 46 0.1735 0.0794 0.3696 2.1 3edp-a1-m1-cB_3edp-a1-m1-cA
28 3edp-a1-m1-cA 217 46 0.1735 0.0783 0.3696 2.1 3edp-a1-m1-cB_3edp-a1-m1-cA
29 4mnu-a1-m1-cA 149 33 0.1224 0.0805 0.3636 2.4 4mnu-a1-m1-cB_4mnu-a1-m1-cA
30 4mnu-a1-m1-cB 148 33 0.1224 0.0811 0.3636 2.4 4mnu-a1-m1-cB_4mnu-a1-m1-cA
31 7dvn-a1-m2-cA 135 30 0.1531 0.1111 0.5000 3.9 7dvn-a1-m1-cA_7dvn-a1-m2-cA
32 7dvn-a1-m1-cA 135 30 0.1531 0.1111 0.5000 3.9 7dvn-a1-m1-cA_7dvn-a1-m2-cA
33 3mlf-a1-m1-cB 89 33 0.1020 0.1124 0.3030 4.2 3mlf-a1-m1-cB_3mlf-a1-m1-cA
34 2e0n-a1-m1-cB 238 20 0.0918 0.0378 0.4500 4.3 2e0n-a1-m1-cA_2e0n-a1-m1-cB
35 2e0n-a1-m1-cA 229 20 0.0918 0.0393 0.4500 4.7 2e0n-a1-m1-cA_2e0n-a1-m1-cB
36 3mlf-a1-m1-cA 92 33 0.1020 0.1087 0.3030 4.7 3mlf-a1-m1-cB_3mlf-a1-m1-cA
37 3hrs-a1-m1-cA 214 66 0.1633 0.0748 0.2424 7.1 3hrs-a1-m1-cB_3hrs-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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