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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
KETFRKYLEQAGAIDVLVKVLVQLYEEPSKPKTALDYIKQCLGSPTPAEYEAVVAERDGL
QKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7som-a1-m1-cV 67 63 1.0000 0.9403 1.0000 8.15e-41 7som-a1-m1-cW_7som-a1-m1-cV
2 7som-a1-m1-cW 63 63 1.0000 1.0000 1.0000 1.28e-40 7som-a1-m1-cW_7som-a1-m1-cV
3 7sqc-a1-m1-c0K 63 59 0.9365 0.9365 1.0000 5.27e-38 7sqc-a1-m1-c0L_7sqc-a1-m1-c0K
4 7sqc-a1-m1-c0D 63 63 0.9365 0.9365 0.9365 4.78e-35 7sqc-a1-m1-c0C_7sqc-a1-m1-c0D
5 7sqc-a1-m1-c0C 58 62 0.9206 1.0000 0.9355 3.20e-34 7sqc-a1-m1-c0C_7sqc-a1-m1-c0D
6 7sqc-a1-m1-c0L 54 51 0.8095 0.9444 1.0000 6.89e-32 7sqc-a1-m1-c0L_7sqc-a1-m1-c0K
7 6rwa-a1-m1-cE 2361 34 0.2540 0.0068 0.4706 0.46 6rwa-a1-m1-cC_6rwa-a1-m1-cE, 6rwa-a1-m1-cD_6rwa-a1-m1-cE
8 6rwa-a1-m1-cD 2361 34 0.2540 0.0068 0.4706 0.46 6rwa-a1-m1-cD_6rwa-a1-m1-cE
9 6rwa-a1-m1-cC 2361 34 0.2540 0.0068 0.4706 0.46 6rwa-a1-m1-cC_6rwa-a1-m1-cE
10 2pbq-a1-m1-cB 165 42 0.2063 0.0788 0.3095 0.73 2pbq-a1-m1-cB_2pbq-a1-m1-cC
11 2pbq-a1-m1-cC 172 39 0.2222 0.0814 0.3590 1.2 2pbq-a1-m1-cB_2pbq-a1-m1-cC
12 2yy0-a3-m3-cD 53 16 0.1270 0.1509 0.5000 2.8 2yy0-a3-m2-cA_2yy0-a3-m3-cD, 2yy0-a3-m2-cD_2yy0-a3-m3-cD, 2yy0-a3-m3-cC_2yy0-a3-m3-cD
13 2yy0-a3-m2-cD 53 16 0.1270 0.1509 0.5000 2.8 2yy0-a3-m2-cD_2yy0-a3-m3-cD
14 3dcf-a1-m1-cB 181 34 0.1905 0.0663 0.3529 6.3 3dcf-a1-m1-cB_3dcf-a1-m1-cA
15 3now-a2-m3-cA 786 38 0.1746 0.0140 0.2895 6.9 3now-a2-m2-cA_3now-a2-m3-cA
16 3now-a2-m2-cA 786 38 0.1746 0.0140 0.2895 6.9 3now-a2-m2-cA_3now-a2-m3-cA
17 3wiu-a4-m1-cB 387 39 0.1905 0.0310 0.3077 7.0 3wiu-a4-m1-cB_3wiu-a4-m1-cA
18 3rh7-a2-m1-cD 284 35 0.1746 0.0387 0.3143 7.3 3rh7-a2-m1-cC_3rh7-a2-m1-cD
19 3rh7-a2-m1-cC 284 35 0.1746 0.0387 0.3143 7.3 3rh7-a2-m1-cC_3rh7-a2-m1-cD
20 3dcf-a1-m1-cA 183 34 0.1905 0.0656 0.3529 7.4 3dcf-a1-m1-cB_3dcf-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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