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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
KEWPLWEVFVRSKQGLEHKHCGSLHATDAQQALHARDVYTRRQEGVSIWVVPSTAITASA
P

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3egr-a1-m2-cA 62 61 1.0000 0.9839 1.0000 5.08e-41 3egr-a1-m2-cB_3egr-a1-m2-cA
2 3egr-a1-m1-cA 62 61 1.0000 0.9839 1.0000 5.08e-41 3egr-a1-m2-cB_3egr-a1-m1-cA
3 3egr-a1-m2-cB 61 61 1.0000 1.0000 1.0000 5.46e-41 3egr-a1-m2-cB_3egr-a1-m1-cA, 3egr-a1-m2-cB_3egr-a1-m2-cA
4 4iit-a1-m2-cB 63 60 0.6885 0.6667 0.7000 7.00e-25 4iit-a1-m1-cB_4iit-a1-m2-cB
5 4iit-a1-m1-cB 63 60 0.6885 0.6667 0.7000 7.00e-25 4iit-a1-m1-cB_4iit-a1-m2-cB
6 4bhk-a1-m1-cB 158 42 0.1803 0.0696 0.2619 0.21 4bhk-a1-m1-cA_4bhk-a1-m1-cB
7 4bhk-a1-m1-cA 158 42 0.1803 0.0696 0.2619 0.21 4bhk-a1-m1-cA_4bhk-a1-m1-cB
8 2p6p-a1-m1-cA 382 35 0.2131 0.0340 0.3714 3.7 2p6p-a1-m1-cB_2p6p-a1-m1-cA
9 2p6p-a1-m1-cB 376 35 0.2131 0.0346 0.3714 3.8 2p6p-a1-m1-cB_2p6p-a1-m1-cA
10 2vy1-a1-m2-cA 163 30 0.1639 0.0613 0.3333 7.5 2vy1-a1-m1-cA_2vy1-a1-m2-cA
11 2vy1-a1-m1-cA 163 30 0.1639 0.0613 0.3333 7.5 2vy1-a1-m1-cA_2vy1-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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