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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
KFNKEKTRAGAEIHSLPNLNVEQKFAFIVSLFDDPSQSANLLAEAKKLNDAQAPK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5efw-a1-m1-cB 55 55 1.0000 1.0000 1.0000 2.78e-34 5efw-a1-m1-cC_5efw-a1-m1-cB
2 5efw-a1-m1-cC 49 49 0.8909 1.0000 1.0000 5.99e-30 5efw-a1-m1-cC_5efw-a1-m1-cB
3 2otk-a1-m1-cF 43 43 0.6182 0.7907 0.7907 1.30e-15 2otk-a1-m1-cE_2otk-a1-m1-cF
4 2otk-a1-m1-cE 43 43 0.6182 0.7907 0.7907 1.30e-15 2otk-a1-m1-cE_2otk-a1-m1-cF
5 7o8c-a1-m1-cA 582 54 0.7636 0.0722 0.7778 3.57e-14 7o8c-a1-m1-cB_7o8c-a1-m1-cA
6 7o8c-a1-m1-cB 579 40 0.6182 0.0587 0.8500 2.89e-13 7o8c-a1-m1-cB_7o8c-a1-m1-cA
7 6o2d-a1-m1-cA 134 33 0.2364 0.0970 0.3939 7.1 6o2d-a1-m1-cA_6o2d-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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