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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
KFVEVRIRLKKGLNPEAATIERALALLGYEVEDTDTTDVITFTDEDSLEAVEREVEDCQR
LLCNPVIHDYDVSINE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1gtd-a1-m2-cB 79 76 1.0000 0.9620 1.0000 1.11e-50 1gtd-a1-m1-cA_1gtd-a1-m2-cB, 1gtd-a1-m2-cA_1gtd-a1-m2-cB
2 1gtd-a1-m2-cA 76 76 1.0000 1.0000 1.0000 1.60e-50 1gtd-a1-m2-cA_1gtd-a1-m2-cB
3 1gtd-a1-m1-cA 76 76 1.0000 1.0000 1.0000 1.60e-50 1gtd-a1-m1-cA_1gtd-a1-m2-cB
4 2yx5-a1-m4-cA 82 75 0.4342 0.4024 0.4400 5.59e-12 2yx5-a1-m1-cA_2yx5-a1-m4-cA, 2yx5-a1-m2-cA_2yx5-a1-m4-cA, 2yx5-a1-m3-cA_2yx5-a1-m4-cA
5 2yx5-a1-m3-cA 82 75 0.4342 0.4024 0.4400 5.59e-12 2yx5-a1-m3-cA_2yx5-a1-m4-cA
6 2yx5-a1-m2-cA 82 75 0.4342 0.4024 0.4400 5.59e-12 2yx5-a1-m2-cA_2yx5-a1-m4-cA
7 2yx5-a1-m1-cA 82 75 0.4342 0.4024 0.4400 5.59e-12 2yx5-a1-m1-cA_2yx5-a1-m4-cA
8 1twj-a1-m1-cD 80 79 0.3421 0.3250 0.3291 2.33e-04 1twj-a1-m1-cA_1twj-a1-m1-cD
9 1twj-a1-m1-cA 80 79 0.3421 0.3250 0.3291 2.33e-04 1twj-a1-m1-cA_1twj-a1-m1-cD
10 2dgb-a1-m1-cD 81 63 0.3421 0.3210 0.4127 5.50e-04 2dgb-a1-m1-cA_2dgb-a1-m1-cD
11 2dgb-a1-m1-cA 81 63 0.3421 0.3210 0.4127 5.50e-04 2dgb-a1-m1-cA_2dgb-a1-m1-cD
12 1t4a-a1-m2-cB 76 75 0.3158 0.3158 0.3200 0.004 1t4a-a1-m1-cB_1t4a-a1-m2-cB, 1t4a-a1-m2-cA_1t4a-a1-m2-cB
13 1t4a-a1-m2-cA 76 75 0.3158 0.3158 0.3200 0.004 1t4a-a1-m1-cA_1t4a-a1-m2-cA, 1t4a-a1-m2-cA_1t4a-a1-m2-cB
14 1t4a-a1-m1-cB 76 75 0.3158 0.3158 0.3200 0.004 1t4a-a1-m1-cB_1t4a-a1-m2-cB
15 1t4a-a1-m1-cA 76 75 0.3158 0.3158 0.3200 0.004 1t4a-a1-m1-cA_1t4a-a1-m2-cA
16 1xx6-a2-m2-cB 162 53 0.2237 0.1049 0.3208 0.064 1xx6-a2-m2-cB_1xx6-a2-m1-cA, 1xx6-a2-m2-cB_1xx6-a2-m2-cA
17 4x9w-a1-m1-cA 226 35 0.1711 0.0575 0.3714 2.8 4x9w-a1-m1-cB_4x9w-a1-m1-cA
18 3f9i-a1-m2-cB 229 55 0.1842 0.0611 0.2545 2.8 3f9i-a1-m1-cB_3f9i-a1-m2-cB, 3f9i-a1-m2-cA_3f9i-a1-m2-cB
19 3f9i-a1-m1-cB 229 55 0.1842 0.0611 0.2545 2.8 3f9i-a1-m1-cB_3f9i-a1-m2-cB
20 3d54-a3-m1-cC 82 62 0.2632 0.2439 0.3226 3.0 3d54-a3-m1-cB_3d54-a3-m1-cC
21 3d54-a3-m1-cB 82 62 0.2632 0.2439 0.3226 3.0 3d54-a3-m1-cB_3d54-a3-m1-cC
22 1vq3-a1-m1-cD 84 62 0.2632 0.2381 0.3226 3.4 1vq3-a1-m1-cD_1vq3-a1-m1-cA
23 6tmm-a1-m1-cAAA 156 79 0.2632 0.1282 0.2532 3.6 6tmm-a1-m1-cDDD_6tmm-a1-m1-cAAA
24 6y75-a1-m1-cA 153 79 0.2632 0.1307 0.2532 3.6 6y75-a1-m1-cB_6y75-a1-m1-cA
25 7ocn-a1-m1-cB 679 17 0.1316 0.0147 0.5882 3.9 7ocn-a1-m1-cB_7ocn-a1-m1-cA
26 1vq3-a1-m1-cA 86 62 0.2632 0.2326 0.3226 4.1 1vq3-a1-m1-cD_1vq3-a1-m1-cA
27 1z1y-a1-m1-cA 159 55 0.1974 0.0943 0.2727 5.4 1z1y-a1-m1-cB_1z1y-a1-m1-cA
28 1z1y-a1-m1-cB 157 55 0.1974 0.0955 0.2727 6.0 1z1y-a1-m1-cB_1z1y-a1-m1-cA
29 2hxv-a1-m2-cA 344 57 0.2500 0.0552 0.3333 6.4 2hxv-a1-m1-cA_2hxv-a1-m2-cA
30 2hxv-a1-m1-cA 344 57 0.2500 0.0552 0.3333 6.4 2hxv-a1-m1-cA_2hxv-a1-m2-cA
31 4esy-a1-m1-cA 160 37 0.1579 0.0750 0.3243 6.5 4esy-a1-m1-cB_4esy-a1-m1-cA
32 5ojo-a1-m1-cB 265 20 0.1579 0.0453 0.6000 6.7 5ojo-a1-m1-cA_5ojo-a1-m1-cB
33 5ojo-a1-m1-cA 265 20 0.1579 0.0453 0.6000 6.7 5ojo-a1-m1-cA_5ojo-a1-m1-cB
34 6ssd-a1-m2-cA 424 31 0.1842 0.0330 0.4516 8.1 6ssd-a1-m1-cA_6ssd-a1-m2-cA
35 6ssd-a1-m1-cA 424 31 0.1842 0.0330 0.4516 8.1 6ssd-a1-m1-cA_6ssd-a1-m2-cA
36 5v56-a1-m1-cA 632 23 0.1579 0.0190 0.5217 8.7 5v56-a1-m1-cA_5v56-a1-m1-cB
37 5v56-a1-m1-cB 634 23 0.1579 0.0189 0.5217 8.7 5v56-a1-m1-cA_5v56-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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