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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
KFVEVRIRLKKGLNPEAATIERALALLGYEVEDTDTTDVITFTDEDSLEAVEREVEDCQR
LLCNPVIHDYDVSINESSH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1gtd-a1-m2-cB 79 79 1.0000 1.0000 1.0000 2.75e-53 1gtd-a1-m1-cA_1gtd-a1-m2-cB, 1gtd-a1-m2-cA_1gtd-a1-m2-cB
2 1gtd-a1-m2-cA 76 76 0.9620 1.0000 1.0000 1.16e-50 1gtd-a1-m2-cA_1gtd-a1-m2-cB
3 1gtd-a1-m1-cA 76 76 0.9620 1.0000 1.0000 1.16e-50 1gtd-a1-m1-cA_1gtd-a1-m2-cB
4 2yx5-a1-m4-cA 82 75 0.4177 0.4024 0.4400 5.36e-12 2yx5-a1-m1-cA_2yx5-a1-m4-cA, 2yx5-a1-m2-cA_2yx5-a1-m4-cA, 2yx5-a1-m3-cA_2yx5-a1-m4-cA
5 2yx5-a1-m3-cA 82 75 0.4177 0.4024 0.4400 5.36e-12 2yx5-a1-m3-cA_2yx5-a1-m4-cA
6 2yx5-a1-m2-cA 82 75 0.4177 0.4024 0.4400 5.36e-12 2yx5-a1-m2-cA_2yx5-a1-m4-cA
7 2yx5-a1-m1-cA 82 75 0.4177 0.4024 0.4400 5.36e-12 2yx5-a1-m1-cA_2yx5-a1-m4-cA
8 1twj-a1-m1-cD 80 79 0.3291 0.3250 0.3291 2.86e-04 1twj-a1-m1-cA_1twj-a1-m1-cD
9 1twj-a1-m1-cA 80 79 0.3291 0.3250 0.3291 2.86e-04 1twj-a1-m1-cA_1twj-a1-m1-cD
10 1t4a-a1-m2-cB 76 75 0.3038 0.3158 0.3200 0.005 1t4a-a1-m1-cB_1t4a-a1-m2-cB, 1t4a-a1-m2-cA_1t4a-a1-m2-cB
11 1t4a-a1-m2-cA 76 75 0.3038 0.3158 0.3200 0.005 1t4a-a1-m1-cA_1t4a-a1-m2-cA, 1t4a-a1-m2-cA_1t4a-a1-m2-cB
12 1t4a-a1-m1-cB 76 75 0.3038 0.3158 0.3200 0.005 1t4a-a1-m1-cB_1t4a-a1-m2-cB
13 1t4a-a1-m1-cA 76 75 0.3038 0.3158 0.3200 0.005 1t4a-a1-m1-cA_1t4a-a1-m2-cA
14 1xx6-a2-m2-cB 162 53 0.2152 0.1049 0.3208 0.055 1xx6-a2-m2-cB_1xx6-a2-m1-cA, 1xx6-a2-m2-cB_1xx6-a2-m2-cA
15 4x9w-a1-m1-cA 226 35 0.1646 0.0575 0.3714 2.7 4x9w-a1-m1-cB_4x9w-a1-m1-cA
16 1vq3-a1-m1-cD 84 62 0.2532 0.2381 0.3226 3.1 1vq3-a1-m1-cD_1vq3-a1-m1-cA
17 3d54-a3-m1-cC 82 62 0.2532 0.2439 0.3226 3.2 3d54-a3-m1-cB_3d54-a3-m1-cC
18 3d54-a3-m1-cB 82 62 0.2532 0.2439 0.3226 3.2 3d54-a3-m1-cB_3d54-a3-m1-cC
19 1vq3-a1-m1-cA 86 62 0.2532 0.2326 0.3226 3.4 1vq3-a1-m1-cD_1vq3-a1-m1-cA
20 6y75-a1-m1-cA 153 79 0.2532 0.1307 0.2532 4.1 6y75-a1-m1-cB_6y75-a1-m1-cA
21 7ocn-a1-m1-cB 679 17 0.1266 0.0147 0.5882 4.4 7ocn-a1-m1-cB_7ocn-a1-m1-cA
22 4dj3-a1-m1-cA 298 38 0.1646 0.0436 0.3421 4.5 4dj3-a1-m1-cB_4dj3-a1-m1-cA
23 6tmm-a1-m1-cAAA 156 79 0.2532 0.1282 0.2532 4.6 6tmm-a1-m1-cDDD_6tmm-a1-m1-cAAA
24 1z1y-a1-m1-cA 159 55 0.1899 0.0943 0.2727 5.5 1z1y-a1-m1-cB_1z1y-a1-m1-cA
25 4esy-a1-m1-cA 160 37 0.1519 0.0750 0.3243 6.7 4esy-a1-m1-cB_4esy-a1-m1-cA
26 1z1y-a1-m1-cB 157 55 0.1899 0.0955 0.2727 7.0 1z1y-a1-m1-cB_1z1y-a1-m1-cA
27 5ojo-a1-m1-cB 265 20 0.1519 0.0453 0.6000 7.7 5ojo-a1-m1-cA_5ojo-a1-m1-cB
28 5ojo-a1-m1-cA 265 20 0.1519 0.0453 0.6000 7.7 5ojo-a1-m1-cA_5ojo-a1-m1-cB
29 6ssd-a1-m2-cA 424 31 0.1772 0.0330 0.4516 8.9 6ssd-a1-m1-cA_6ssd-a1-m2-cA
30 6ssd-a1-m1-cA 424 31 0.1772 0.0330 0.4516 8.9 6ssd-a1-m1-cA_6ssd-a1-m2-cA
31 5v56-a1-m1-cA 632 23 0.1519 0.0190 0.5217 9.6 5v56-a1-m1-cA_5v56-a1-m1-cB
32 5v56-a1-m1-cB 634 23 0.1519 0.0189 0.5217 9.6 5v56-a1-m1-cA_5v56-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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