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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=28)
KGAIIGLMVGGVVIATVIVITLVMLKKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2loh-a1-m1-cB 43 28 1.0000 0.6512 1.0000 1.36e-10 2loh-a1-m1-cA_2loh-a1-m1-cB
2 2loh-a1-m1-cA 43 28 1.0000 0.6512 1.0000 1.36e-10 2loh-a1-m1-cA_2loh-a1-m1-cB
3 2lz3-a1-m1-cB 28 28 1.0000 1.0000 1.0000 2.25e-10 2lz3-a1-m1-cA_2lz3-a1-m1-cB
4 2lz3-a1-m1-cA 28 28 1.0000 1.0000 1.0000 2.25e-10 2lz3-a1-m1-cA_2lz3-a1-m1-cB
5 2lz4-a1-m1-cB 28 28 0.9643 0.9643 0.9643 6.69e-10 2lz4-a1-m1-cA_2lz4-a1-m1-cB
6 2lz4-a1-m1-cA 28 28 0.9643 0.9643 0.9643 6.69e-10 2lz4-a1-m1-cA_2lz4-a1-m1-cB
7 3moq-a5-m1-cD 126 15 0.5000 0.1111 0.9333 0.045 3moq-a5-m1-cA_3moq-a5-m1-cD, 3moq-a5-m1-cB_3moq-a5-m1-cD, 3moq-a5-m1-cC_3moq-a5-m1-cD
8 3moq-a5-m1-cC 126 15 0.5000 0.1111 0.9333 0.045 3moq-a5-m1-cC_3moq-a5-m1-cD
9 3moq-a5-m1-cB 126 15 0.5000 0.1111 0.9333 0.045 3moq-a5-m1-cB_3moq-a5-m1-cD
10 3moq-a5-m1-cA 126 15 0.5000 0.1111 0.9333 0.045 3moq-a5-m1-cA_3moq-a5-m1-cD

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Reference:
Jacob Schwartz et al.

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