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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
KGLSNLHRIVTEDLQALEKSVSNLEESLTSLSEVVLQNRRGLDLLFLKEGGLCVALKEEC
SFYVDHSGAIRDSMSKLRERLEK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7s94-a2-m1-cF 83 83 1.0000 1.0000 1.0000 3.10e-54 7s94-a2-m1-cE_7s94-a2-m1-cF
2 7s94-a2-m1-cE 76 76 0.9157 1.0000 1.0000 3.41e-49 7s94-a2-m1-cE_7s94-a2-m1-cF
3 4jgs-a2-m1-cB 82 81 0.7470 0.7561 0.7654 6.20e-39 4jgs-a2-m1-cF_4jgs-a2-m1-cB
4 4jgs-a2-m1-cF 80 77 0.7349 0.7625 0.7922 1.79e-38 4jgs-a2-m1-cF_4jgs-a2-m1-cB
5 1mof-a1-m3-cA 53 53 0.5422 0.8491 0.8491 5.83e-27 1mof-a1-m2-cA_1mof-a1-m3-cA
6 1mof-a1-m2-cA 53 53 0.5422 0.8491 0.8491 5.83e-27 1mof-a1-m2-cA_1mof-a1-m3-cA
7 4jf3-a2-m5-cB 92 77 0.4458 0.4022 0.4805 6.21e-24 4jf3-a2-m4-cB_4jf3-a2-m5-cB
8 4jf3-a2-m4-cB 92 77 0.4458 0.4022 0.4805 6.21e-24 4jf3-a2-m4-cB_4jf3-a2-m5-cB
9 5ha6-a1-m4-cA 93 71 0.3735 0.3333 0.4366 1.44e-17 5ha6-a1-m2-cA_5ha6-a1-m4-cA
10 5ha6-a1-m2-cA 93 71 0.3735 0.3333 0.4366 1.44e-17 5ha6-a1-m2-cA_5ha6-a1-m4-cA
11 5ha6-a2-m5-cB 79 71 0.2892 0.3038 0.3380 1.65e-08 5ha6-a2-m3-cB_5ha6-a2-m5-cB
12 5ha6-a2-m3-cB 79 71 0.2892 0.3038 0.3380 1.65e-08 5ha6-a2-m3-cB_5ha6-a2-m5-cB
13 5h9c-a1-m3-cA 78 64 0.2530 0.2692 0.3281 9.26e-05 5h9c-a1-m2-cA_5h9c-a1-m3-cA
14 5h9c-a1-m2-cA 78 64 0.2530 0.2692 0.3281 9.26e-05 5h9c-a1-m2-cA_5h9c-a1-m3-cA
15 3s88-a5-m9-cJ 106 58 0.1928 0.1509 0.2759 0.23 3s88-a5-m5-cJ_3s88-a5-m9-cJ
16 3s88-a5-m5-cJ 106 58 0.1928 0.1509 0.2759 0.23 3s88-a5-m5-cJ_3s88-a5-m9-cJ
17 4g2k-a1-m1-cC 107 45 0.1687 0.1308 0.3111 0.32 4g2k-a1-m1-cC_4g2k-a1-m1-cB
18 4g2k-a1-m1-cB 108 45 0.1687 0.1296 0.3111 0.33 4g2k-a1-m1-cC_4g2k-a1-m1-cB
19 7c11-a1-m1-cD 556 59 0.2169 0.0324 0.3051 4.9 7c11-a1-m1-cC_7c11-a1-m1-cD, 7c11-a1-m1-cD_7c11-a1-m1-cB
20 7c11-a1-m1-cC 556 59 0.2169 0.0324 0.3051 4.9 7c11-a1-m1-cC_7c11-a1-m1-cD
21 7c11-a1-m1-cB 558 59 0.2169 0.0323 0.3051 4.9 7c11-a1-m1-cD_7c11-a1-m1-cB
22 2f9q-a2-m2-cD 451 46 0.2289 0.0421 0.4130 8.8 2f9q-a2-m1-cB_2f9q-a2-m2-cD, 2f9q-a2-m2-cD_2f9q-a2-m2-cA
23 2f9q-a2-m1-cB 451 46 0.2289 0.0421 0.4130 8.8 2f9q-a2-m1-cB_2f9q-a2-m2-cD
24 2f9q-a1-m1-cD 451 46 0.2289 0.0421 0.4130 8.8 2f9q-a1-m1-cB_2f9q-a1-m1-cD, 2f9q-a1-m1-cD_2f9q-a1-m1-cC
25 2f9q-a1-m1-cB 451 46 0.2289 0.0421 0.4130 8.8 2f9q-a1-m1-cB_2f9q-a1-m1-cD
26 2f9q-a2-m2-cA 454 46 0.2289 0.0419 0.4130 8.8 2f9q-a2-m2-cD_2f9q-a2-m2-cA
27 2f9q-a1-m1-cC 454 46 0.2289 0.0419 0.4130 8.8 2f9q-a1-m1-cD_2f9q-a1-m1-cC
28 3qm4-a1-m1-cB 457 46 0.2289 0.0416 0.4130 8.8 3qm4-a1-m1-cB_3qm4-a1-m1-cA
29 3qm4-a1-m1-cA 465 46 0.2289 0.0409 0.4130 8.8 3qm4-a1-m1-cB_3qm4-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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