Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=74)
KHVTAAALAEEIGDRLKQARLNRDLTQSEVAEIAGIARKTVLNAEKGKVQLDIIAILALD
LTEQIDLFIPKQEI

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 4ghj-a1-m1-cB 74 74 1.0000 1.0000 1.0000 9.81e-47 4ghj-a1-m1-cA_4ghj-a1-m1-cB
2 4ghj-a1-m1-cA 71 71 0.9595 1.0000 1.0000 1.26e-44 4ghj-a1-m1-cA_4ghj-a1-m1-cB
3 1y7y-a1-m1-cA 69 49 0.2027 0.2174 0.3061 0.005 1y7y-a1-m1-cB_1y7y-a1-m1-cA
4 1y7y-a1-m1-cB 66 49 0.2027 0.2273 0.3061 0.005 1y7y-a1-m1-cB_1y7y-a1-m1-cA
5 4cyd-a1-m1-cB 225 51 0.2568 0.0844 0.3725 0.007 4cyd-a1-m1-cD_4cyd-a1-m1-cB
6 2b5a-a2-m1-cD 76 49 0.1892 0.1842 0.2857 0.026 2b5a-a2-m1-cC_2b5a-a2-m1-cD
7 2b5a-a2-m1-cC 76 49 0.1892 0.1842 0.2857 0.026 2b5a-a2-m1-cC_2b5a-a2-m1-cD
8 3zkc-a1-m1-cA 61 35 0.1892 0.2295 0.4000 0.028 3zkc-a1-m1-cA_3zkc-a1-m1-cB
9 3zkc-a1-m1-cB 63 35 0.1892 0.2222 0.4000 0.029 3zkc-a1-m1-cA_3zkc-a1-m1-cB
10 2k9q-a1-m1-cB 77 57 0.2297 0.2208 0.2982 0.047 2k9q-a1-m1-cA_2k9q-a1-m1-cB
11 2k9q-a1-m1-cA 77 57 0.2297 0.2208 0.2982 0.047 2k9q-a1-m1-cA_2k9q-a1-m1-cB
12 1b0n-a6-m3-cA 103 36 0.1892 0.1359 0.3889 0.052 1b0n-a6-m1-cA_1b0n-a6-m3-cA
13 1b0n-a6-m1-cA 103 36 0.1892 0.1359 0.3889 0.052 1b0n-a6-m1-cA_1b0n-a6-m3-cA
14 1b0n-a5-m2-cA 103 36 0.1892 0.1359 0.3889 0.052 1b0n-a5-m1-cA_1b0n-a5-m2-cA
15 1b0n-a5-m1-cA 103 36 0.1892 0.1359 0.3889 0.052 1b0n-a5-m1-cA_1b0n-a5-m2-cA
16 4cyd-a1-m1-cD 214 22 0.1622 0.0561 0.5455 0.073 4cyd-a1-m1-cD_4cyd-a1-m1-cB
17 4a2u-a4-m1-cH 227 59 0.2703 0.0881 0.3390 0.14 4a2u-a4-m1-cG_4a2u-a4-m1-cH
18 4a2u-a4-m1-cG 224 59 0.2703 0.0893 0.3390 0.16 4a2u-a4-m1-cG_4a2u-a4-m1-cH
19 4pu7-a1-m1-cB 64 38 0.1757 0.2031 0.3421 0.29 4pu7-a1-m1-cB_4pu7-a1-m1-cA
20 4pu7-a1-m1-cA 71 38 0.1757 0.1831 0.3421 0.30 4pu7-a1-m1-cB_4pu7-a1-m1-cA
21 3eus-a1-m1-cB 77 40 0.2162 0.2078 0.4000 0.33 3eus-a1-m1-cB_3eus-a1-m1-cA
22 5d1w-a1-m1-cB 195 48 0.2568 0.0974 0.3958 0.35 5d1w-a1-m1-cA_5d1w-a1-m1-cB
23 5d1w-a1-m1-cA 195 48 0.2568 0.0974 0.3958 0.35 5d1w-a1-m1-cA_5d1w-a1-m1-cB
24 3eus-a1-m1-cA 85 43 0.2162 0.1882 0.3721 0.39 3eus-a1-m1-cB_3eus-a1-m1-cA
25 4yba-a1-m1-cA 77 32 0.1892 0.1818 0.4375 0.63 4yba-a1-m1-cA_4yba-a1-m1-cB
26 6jq1-a1-m1-cA 129 64 0.2297 0.1318 0.2656 0.67 6jq1-a1-m1-cA_6jq1-a1-m1-cB
27 4yba-a1-m1-cB 78 32 0.1892 0.1795 0.4375 0.68 4yba-a1-m1-cA_4yba-a1-m1-cB
28 6jq1-a1-m1-cB 130 64 0.2297 0.1308 0.2656 0.68 6jq1-a1-m1-cA_6jq1-a1-m1-cB
29 2cro-a1-m3-cA 65 38 0.1622 0.1846 0.3158 0.83 2cro-a1-m2-cA_2cro-a1-m3-cA
30 2cro-a1-m2-cA 65 38 0.1622 0.1846 0.3158 0.83 2cro-a1-m2-cA_2cro-a1-m3-cA
31 3cro-a1-m1-cR 64 38 0.1622 0.1875 0.3158 0.86 3cro-a1-m1-cR_3cro-a1-m1-cL
32 3cro-a1-m1-cL 66 38 0.1622 0.1818 0.3158 0.87 3cro-a1-m1-cR_3cro-a1-m1-cL
33 1vz0-a4-m1-cF 188 30 0.2297 0.0904 0.5667 0.89 1vz0-a4-m1-cF_1vz0-a4-m1-cE
34 7ets-a1-m1-cB 222 39 0.2027 0.0676 0.3846 0.92 7ets-a1-m1-cA_7ets-a1-m1-cB
35 1vz0-a4-m1-cE 191 27 0.2162 0.0838 0.5926 0.94 1vz0-a4-m1-cF_1vz0-a4-m1-cE
36 7ets-a1-m1-cA 221 39 0.2027 0.0679 0.3846 0.94 7ets-a1-m1-cA_7ets-a1-m1-cB
37 3fai-a2-m2-cA 227 33 0.1757 0.0573 0.3939 1.3 3fai-a2-m1-cA_3fai-a2-m2-cA
38 3fai-a2-m1-cA 227 33 0.1757 0.0573 0.3939 1.3 3fai-a2-m1-cA_3fai-a2-m2-cA
39 7t8i-a1-m1-cB 64 45 0.2162 0.2500 0.3556 1.6 7t8i-a1-m1-cA_7t8i-a1-m1-cB
40 5yyl-a1-m2-cA 405 45 0.1892 0.0346 0.3111 1.9 5yyl-a1-m2-cB_5yyl-a1-m2-cA
41 1rpe-a1-m1-cR 63 39 0.1622 0.1905 0.3077 2.4 1rpe-a1-m1-cL_1rpe-a1-m1-cR
42 1rpe-a1-m1-cL 63 39 0.1622 0.1905 0.3077 2.4 1rpe-a1-m1-cL_1rpe-a1-m1-cR
43 2xj3-a1-m1-cB 65 38 0.1757 0.2000 0.3421 2.6 2xj3-a1-m1-cB_2xj3-a1-m1-cA
44 2xj3-a1-m1-cA 66 38 0.1757 0.1970 0.3421 2.6 2xj3-a1-m1-cB_2xj3-a1-m1-cA
45 2lyl-a1-m1-cB 66 38 0.1757 0.1970 0.3421 2.8 2lyl-a1-m1-cA_2lyl-a1-m1-cB
46 2lyl-a1-m1-cA 66 38 0.1757 0.1970 0.3421 2.8 2lyl-a1-m1-cA_2lyl-a1-m1-cB
47 7a57-a1-m1-cA 437 29 0.1622 0.0275 0.4138 4.4 7a57-a1-m1-cC_7a57-a1-m1-cA
48 7a57-a1-m1-cC 436 29 0.1622 0.0275 0.4138 4.5 7a57-a1-m1-cC_7a57-a1-m1-cA
49 6af4-a2-m1-cF 91 45 0.1757 0.1429 0.2889 5.9 6af4-a2-m1-cF_6af4-a2-m1-cD
50 6af4-a2-m1-cD 92 45 0.1757 0.1413 0.2889 6.0 6af4-a2-m1-cF_6af4-a2-m1-cD
51 5woq-a2-m1-cB 85 43 0.2027 0.1765 0.3488 7.5 5woq-a2-m1-cC_5woq-a2-m1-cB
52 5woq-a2-m1-cC 83 43 0.2027 0.1807 0.3488 7.8 5woq-a2-m1-cC_5woq-a2-m1-cB
53 6rmq-a2-m3-cB 121 40 0.1622 0.0992 0.3000 7.9 6rmq-a2-m1-cB_6rmq-a2-m3-cB
54 6rmq-a2-m1-cB 121 40 0.1622 0.0992 0.3000 7.9 6rmq-a2-m1-cB_6rmq-a2-m3-cB
55 4oqj-a1-m2-cA 674 38 0.1757 0.0193 0.3421 7.9 4oqj-a1-m1-cA_4oqj-a1-m2-cA
56 4oqj-a1-m1-cA 674 38 0.1757 0.0193 0.3421 7.9 4oqj-a1-m1-cA_4oqj-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600